KEGG   Dinoroseobacter shibae: Dshi_1611
Entry
Dshi_1611         CDS       T00612                                 
Symbol
xerD
Name
(GenBank) tyrosine recombinase
  KO
K04763  integrase/recombinase XerD
Organism
dsh  Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:dsh03036]
    Dshi_1611 (xerD)
Chromosome and associated proteins [BR:dsh03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    Dshi_1611 (xerD)
SSDB
Motif
Pfam: Phage_integrase Phage_int_SAM_1 Phage_int_SAM_4 Phage_int_SAM_5 IL28A GIT_SHD
Other DBs
NCBI-ProteinID: ABV93353
RoseoBase: Dshi_1611
UniProt: A8LKY9
LinkDB
Position
1674956..1675882
AA seq 308 aa
MSLHWIDAFLDAQAAELNAAENTRLAYARDLMDFQGHIRRRGLDFDQVQRADIETYLIAC
SDAGLSQATRARRLSAIRQLYRFAYEEGWRTDNPSLQIKGPGRAKRLPKTLSEADVDRLL
AAARNTGRSPSDRQRNACMLELLYATGLRVTELCGLPVAAVRGDPHLILVRGKGGKERMV
PLSTPARTELQAWLKVRDAAEQTAISKGAAPSKYLFPSRGKLGHLTRHRFYALIKDIAVA
AGVDPSGVTPHTLRHAFATHLLARGADLMSIQALLGHADVATTEIYTHVLDARLRELVLT
HHPLATKG
NT seq 927 nt   +upstreamnt  +downstreamnt
atgagcctgcattggatcgacgcatttctcgatgcccaggcggcagagctgaacgcggct
gagaatacgcgccttgcctatgcccgcgacctgatggatttccagggccatatacgccgt
cgggggctggacttcgaccaggtccagcgcgccgatatcgaaacctatctcatcgcctgc
tctgatgccggtctcagccaggccactcgcgcccgtcggctgtcggcgatccggcaactc
tatcgtttcgcatatgaggaaggctggcgcaccgacaatcccagcctgcagatcaaggga
ccggggcgcgcgaaacgccttcccaagaccttgtcggaggcggatgtggatcgtttgctc
gcggcggcgcggaacacggggcgcagtccgtccgaccggcagcgcaatgcctgcatgctg
gaattgctctatgcgaccggcttgagggtgacggagttgtgcggactaccggtcgcggct
gtgcgcggcgatccgcacctgatcctcgtgcgcggcaagggcggcaaggagcggatggtg
cccctgtcgacaccagcgcgcaccgaattgcaggcttggctgaaagttcgcgacgctgcc
gagcaaaccgcgatcagcaagggggcggcgccctcgaaatacctctttccgtcacgcggc
aagctggggcatctgacccggcaccggttctacgcgctgatcaaggatatcgccgtggca
gcgggcgtggacccgtccggggtcacgccgcacaccttgcgccatgcgttcgcgacacat
ctcttggcacggggcgcggacctgatgtcgattcaggcgcttctgggtcatgcggatgtg
gcgaccaccgagatctacacacatgtgctggacgcgcggctcagggaactggtgctgacc
catcaccccctggcgacaaagggctag

DBGET integrated database retrieval system