Dinoroseobacter shibae: Dshi_1611
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Entry
Dshi_1611 CDS
T00612
Symbol
xerD
Name
(GenBank) tyrosine recombinase
KO
K04763
integrase/recombinase XerD
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsh03036
]
Dshi_1611 (xerD)
Chromosome and associated proteins [BR:
dsh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Dshi_1611 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
IL28A
GIT_SHD
Motif
Other DBs
NCBI-ProteinID:
ABV93353
RoseoBase:
Dshi_1611
UniProt:
A8LKY9
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All DBs
Position
1674956..1675882
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AA seq
308 aa
AA seq
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MSLHWIDAFLDAQAAELNAAENTRLAYARDLMDFQGHIRRRGLDFDQVQRADIETYLIAC
SDAGLSQATRARRLSAIRQLYRFAYEEGWRTDNPSLQIKGPGRAKRLPKTLSEADVDRLL
AAARNTGRSPSDRQRNACMLELLYATGLRVTELCGLPVAAVRGDPHLILVRGKGGKERMV
PLSTPARTELQAWLKVRDAAEQTAISKGAAPSKYLFPSRGKLGHLTRHRFYALIKDIAVA
AGVDPSGVTPHTLRHAFATHLLARGADLMSIQALLGHADVATTEIYTHVLDARLRELVLT
HHPLATKG
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcattggatcgacgcatttctcgatgcccaggcggcagagctgaacgcggct
gagaatacgcgccttgcctatgcccgcgacctgatggatttccagggccatatacgccgt
cgggggctggacttcgaccaggtccagcgcgccgatatcgaaacctatctcatcgcctgc
tctgatgccggtctcagccaggccactcgcgcccgtcggctgtcggcgatccggcaactc
tatcgtttcgcatatgaggaaggctggcgcaccgacaatcccagcctgcagatcaaggga
ccggggcgcgcgaaacgccttcccaagaccttgtcggaggcggatgtggatcgtttgctc
gcggcggcgcggaacacggggcgcagtccgtccgaccggcagcgcaatgcctgcatgctg
gaattgctctatgcgaccggcttgagggtgacggagttgtgcggactaccggtcgcggct
gtgcgcggcgatccgcacctgatcctcgtgcgcggcaagggcggcaaggagcggatggtg
cccctgtcgacaccagcgcgcaccgaattgcaggcttggctgaaagttcgcgacgctgcc
gagcaaaccgcgatcagcaagggggcggcgccctcgaaatacctctttccgtcacgcggc
aagctggggcatctgacccggcaccggttctacgcgctgatcaaggatatcgccgtggca
gcgggcgtggacccgtccggggtcacgccgcacaccttgcgccatgcgttcgcgacacat
ctcttggcacggggcgcggacctgatgtcgattcaggcgcttctgggtcatgcggatgtg
gcgaccaccgagatctacacacatgtgctggacgcgcggctcagggaactggtgctgacc
catcaccccctggcgacaaagggctag
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