Dinoroseobacter shibae: Dshi_1653
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Entry
Dshi_1653 CDS
T00612
Name
(GenBank) HTH-type transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsh03000
]
Dshi_1653
Transcription factors [BR:
dsh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Dshi_1653
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
HTH_24
HTH_3
HTH_IclR
MarR
HTH_AsnC-type
HTH_28
HTH_Tnp_ISL3
HTH_DeoR
HTH_11
HTH_26
MarR_2
HTH_23
HTH_36
HTH_29
HTH_5
HTH_Crp_2
HTH_10
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
ABV93395
RoseoBase:
Dshi_1653
UniProt:
A8LLL7
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Position
1718787..1719851
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AA seq
354 aa
AA seq
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MRIKLTPRDNGHMNLKQLSEKLGLSPTTVSRALNGYPEVSENTRRRIQEAAEQYNYFPSA
RARSLATGRAMAIGHVLPMTISSEMVNPVFGDFLAGAAETYSKSGYDITLSSVRAEDELK
CYRDFAAKRIVDGVIVHAPRTDDPRIALLKELGLPFVVHGRAPIADDSYAWLDINNRRAF
YRATKLLIDLGHREIALINGQEQMDFAQRRRAGYSAAMHSAELTLRPELMVSEEMTEGVG
YAAAKRMLSLKKPPTAFLVSSIITAIGVRRAVSDLGLRLGQDISVVIHDDEISYLRNGDT
EPLFTATRSSVRAAGRRAAEILLQQIAQPEAAPVQELWEVELSLGQSTGPVRHS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgaggatcaagctgaccccgcgcgacaacggacacatgaacctcaagcagctttcggaa
aaactgggcctgtctccgaccacggtgagccgggcgctgaacggctacccggaagtgtcc
gaaaacacccgccgccgcatccaggaggctgcggaacagtacaactatttcccgagcgca
cgagcccggtcgctggccacagggcgcgccatggccattggacacgtgctgccgatgacc
atatcctcggagatggtgaaccctgttttcggcgattttctcgccggggccgccgagacc
tactccaagtccgggtatgacattaccctgtcgagcgtgcgcgctgaggatgagttgaaa
tgctaccgcgatttcgcggccaaacgcatcgtcgacggggtgatcgtccatgcaccgcgc
accgatgatccccgcattgcgctgctgaaagagttggggttgcccttcgtcgtccacgga
cgcgcgcccatcgccgatgacagttatgcttggctcgacatcaacaatcggcgcgccttt
tatcgtgccacgaagctgctgatcgacctcggccatcgggaaatcgccctgatcaacggc
caggagcagatggattttgcacaacgtcggcgtgccggctatagcgccgcgatgcactct
gccgagctcaccctgcgccctgaattgatggtatcggaggagatgaccgaaggcgttgga
tatgctgcggccaaacggatgctgtcgctgaaaaagccacccacggcgtttctcgtctcc
tccatcatcaccgccataggggtccgccgcgctgtcagcgatctcggcctgcggttggga
caggacatctcggtggtcatccatgacgacgagatcagctatctgcgcaacggcgatacg
gaaccgttgttcactgcgacccgctcttcggtgcgcgcggcgggacggcgcgcggcggaa
atcctgctgcagcagatcgcacagcccgaagccgcccccgtgcaagaactctgggaagtg
gagctgtccctcggccaatccaccggacccgtccgccacagctag
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