Dinoroseobacter shibae: Dshi_1689
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Entry
Dshi_1689 CDS
T00612
Name
(GenBank) DNA-glycosylase family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Dshi_1689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsh03400
]
Dshi_1689
Enzymes [BR:
dsh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Dshi_1689
DNA repair and recombination proteins [BR:
dsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Dshi_1689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH_5
AF1548-like_C
Motif
Other DBs
NCBI-ProteinID:
ABV93431
RoseoBase:
Dshi_1689
UniProt:
A8LLQ3
LinkDB
All DBs
Position
complement(1758126..1758758)
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AA seq
210 aa
AA seq
DB search
MSVGRLIETPECLTEGCAHLARVEPRFAAAFAETGPLPLRRRPDGFEALLSAIVSQQVSV
AAANAIWGRLKDARLTGPRKVIWATEQELRACGLSRQKIRYAKALAEARIPFRDLRAAPT
EEVITTLVAVPGIGRWTAEIYAMFSLGRADVFAPADLALQESARLLFALPERPTEKALRE
MAAPWAPWRAVAARGLWAYYHVAKNREGIR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcggacgcctgatcgagacgcccgagtgcctgaccgagggctgcgcgcacctg
gcccgagtggagccgcgattcgcggcggcctttgccgagaccgggccgctgcccctgcgg
cgcaggccggatgggttcgaggcgctgctctcggccattgtcagccaacaggtttcggtg
gcggcggccaatgcgatctgggggcgactgaaggacgcgcgcctgaccgggccgcgcaag
gtgatctgggcgaccgagcaagagctgcgcgcctgtgggctgtcgcggcagaagatccgc
tatgccaaggcgctggccgaggcgcggatcccgtttcgcgacctgcgcgcggcccccacg
gaggaggttatcaccacgctggtggcggttccggggatcgggcgctggaccgcggagatc
tacgccatgttctcgctcgggcgggcggatgtgttcgcgccagcggacctggccttgcag
gaatcggcgcgcctgcttttcgccctgcccgagcgacccaccgagaaggccctgcgcgag
atggccgcgccctgggcaccctggcgggcggttgcggcgcgggggctctgggcctactac
catgtggcaaagaaccgagagggcatccgatga
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