Dinoroseobacter shibae: Dshi_1709
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Entry
Dshi_1709 CDS
T00612
Symbol
mscS
Name
(GenBank) small conductance mechanosensitive channel
KO
K03442
small conductance mechanosensitive channel
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_1709 (mscS)
Transporters [BR:
dsh02000
]
Other transporters
Pores ion channels [TC:
1
]
Dshi_1709 (mscS)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
CDC48_2
Motif
Other DBs
NCBI-ProteinID:
ABV93451
RoseoBase:
Dshi_1709
UniProt:
A8LLS3
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All DBs
Position
complement(1776333..1777817)
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AA seq
494 aa
AA seq
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MAARVRIMSFRKRFGCMMLALAVLVVVSVGGAFAQSADPAPAEVSAQEDAEAAPPEDNAP
AYPAGLDDPTLEIEELRLRLLPLTVDQLTELAAAWQGIVAGQTQAVVDESLALERLPTQE
QEAARARVVALTETRNAGFDRFSEVVSNLARKGGDPATVETYRAYRSSIVVQEKQEADWR
TLAEGALSWAVARDGGVQLAIRIAVIGGAIFALLLVARIVRGYARRMFGKLPNLSKLLQA
FLATIVYWLTIAVGLMVVLSSLGVDITPLFALFGGGAFILAFAMQETLSNLAAGVMIMIN
RPFDEGDYVDVAGLGGTVKNVSIVSTQIVTPDNQIIVIPNSKVWGDVITNVTASDTRRVD
MVFGIGYGDSIQEAQAVLEEVVSGHPLVLKDPAPVIRVNELADSAVNFIVRPWTKTTDYW
AVYWDLQRAVKEAFDAKDISIPFPQTDMHLYMAPKSLPAAVDGLPLARQTSTGRGPGRDD
PGPDDAAEPAPAAG
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgcgtcaggattatgagttttcggaaacgctttggctgcatgatgcttgcg
ctggccgttctggtcgtggtgtcggtcggcggggcgttcgcccagtccgccgaccccgcc
ccggccgaggtgtcggcacaagaggatgccgaggccgcgccgcccgaggacaacgcgccg
gcctatcctgcgggtctcgacgatccgacactcgaaatcgaggagctgcgcctgcggctg
ctgccgctgacggtcgatcagcttacggagcttgccgctgcgtggcaggggatcgtggcc
ggacaaacccaggcggtggtcgatgaatcgcttgcgctggagcgtctgccgacgcaggag
caggaggccgcccgggcccgcgttgtcgcgttgacggagacacgcaatgccgggttcgat
cgcttctcggaagtcgtgagcaatctggcgcgcaagggcggggacccggcgacggtggaa
acctaccgggcctatcgatcctccatcgtcgttcaggaaaagcaggaggcggattggcgg
acgctggccgaaggcgcgttgagctgggcggttgcgcgcgatggcggcgtgcaattggcg
atccgcatcgcggtgatcggcggcgcgatattcgcgctgctgctcgtggcccggatcgtg
cgggggtatgcccggcggatgttcgggaagttaccgaacttgtccaagctgttgcaggcg
ttcctggcgacgattgtctattggctgaccattgcggtggggttgatggtggtcctgtct
tcgctgggtgtggacatcacgccgctcttcgcgctgttcggcggtggtgccttcatcctg
gcctttgccatgcaggagaccctgagcaacctggcggcgggcgtgatgatcatgatcaac
cgtcccttcgatgagggggattatgtcgatgtcgcgggtcttggcgggacggtgaagaac
gtctctatcgtctcgacccagatcgtgacgccggacaaccagatcatcgtgatcccgaac
tccaaggtctggggcgatgtcatcaccaacgtcacggcgtccgatactcgccgggtcgat
atggtgttcggcatcggctatggcgattcgatccaggaggcccaggccgttctggaggag
gtggtttcgggccatcccctggtgttgaaggatcccgccccggtgatccgcgtgaacgaa
ctggccgacagtgccgtgaacttcatcgtgcggccctggaccaaaaccaccgattactgg
gcggtttattgggacctgcagcgcgcggtgaaagaggcgttcgatgccaaggacatctcg
atcccgttcccgcagaccgacatgcatctctacatggcgccgaaatcgttgccggcggcg
gtcgatgggctgcccttggcgcggcagacctccaccgggcgcggtccggggcgcgacgac
ccgggtccggacgacgccgcagagcccgcgccggccgcaggctga
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