Dinoroseobacter shibae: Dshi_1721
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Entry
Dshi_1721 CDS
T00612
Symbol
ihfA
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dsh03032
]
Dshi_1721 (ihfA)
03036 Chromosome and associated proteins [BR:
dsh03036
]
Dshi_1721 (ihfA)
03400 DNA repair and recombination proteins [BR:
dsh03400
]
Dshi_1721 (ihfA)
DNA replication proteins [BR:
dsh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Dshi_1721 (ihfA)
Chromosome and associated proteins [BR:
dsh03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Dshi_1721 (ihfA)
DNA repair and recombination proteins [BR:
dsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Dshi_1721 (ihfA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
ABV93463
RoseoBase:
Dshi_1721
UniProt:
A8LLT5
LinkDB
All DBs
Position
1788324..1788629
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AA seq
101 aa
AA seq
DB search
MAEKTLTRMDLSDAVFREVGLSRNESAQLVESILTHMSDALVRGESVKISSFGTFSVRDK
SARIGRNPKTGEEVPIHPRRVLTFRPSHLMKERVANGNRNR
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaagacactgacgcgcatggacctgagcgatgcggtattccgcgaggtcggc
ctgtcccggaacgaatccgcccaactggtcgagagcatcctgacccatatgtccgacgca
cttgtgcgcggcgaaagcgtcaagatctcgtccttcgggaccttcagcgtgcgcgacaag
tccgcccggatcgggcgcaaccccaagacgggcgaggaagtgccgatccatccgcgccgc
gtgctgaccttccggccctcgcatctgatgaaagaacgggtcgccaatggaaaccgcaac
cgatag
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integrated database retrieval system
