Dinoroseobacter shibae: Dshi_1771
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Entry
Dshi_1771 CDS
T00612
Name
(GenBank) conserved hypothetical protein
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsh03009
]
Dshi_1771
Enzymes [BR:
dsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
Dshi_1771
Ribosome biogenesis [BR:
dsh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Dshi_1771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
Methyltransf_31
MTS
Methyltransf_15
Methyltransf_25
PrmA
FtsJ
Methyltransf_3
UPF0020
Motif
Other DBs
NCBI-ProteinID:
ABV93513
RoseoBase:
Dshi_1771
UniProt:
A8LMG8
LinkDB
All DBs
Position
1838034..1839236
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AA seq
400 aa
AA seq
DB search
MTAPDTRPTIRLKPKADARAIRHGMPWVYADDLVTDRRTKALAPGSLAVLEDAERAPLAL
ATITPASKIIARVLDADPQAEIDQAWFSTRLARALALRETLYDAPFYRLVHAEGDGLPGL
IIDRFGDTCVLQPNAAWLEARLAPLTAALQEVTGVAHVLKSASGRARALEGLDDASGPLA
GAPPARIAVPMTGATYIADLAGGQKTGLFYDQRPNHAFAARFAKGARVLDVFSHVGGFAL
AALAAGAQSALAVDGSAPALALAEEGAAATGVADRFATRKSDAFAALETLATEGAQFDLV
ICDPPAFAPAKSALGQGLRAYERVARLAAPLVAPGGALMLCSCSHAAELAKFRAACLRGV
GRAGRASQIVYTGGAGPDHPLHPQLGETGYLKTLMLRLLP
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgacagcgcccgacactcgcccgacaattcgcctcaagcccaaggccgacgcccgcgcc
atccgccacgggatgccttgggtctatgccgatgacctggtcaccgaccgccgcaccaag
gcgctcgcccccggcagcctcgccgtgctcgaagatgccgagcgcgcgcccctggccctc
gccacgataacacccgcatcgaagatcatcgcccgggtgctggacgccgacccgcaggcc
gagatcgaccaggcctggttttccacccgcctcgcccgcgccctggcgctgcgcgaaact
ctctatgacgcgccgttctaccgcctcgtccatgccgagggcgacgggctgcccgggctg
atcatcgaccgcttcggcgacacctgcgttctgcaacccaacgctgcctggctggaggcg
cggcttgccccgctcaccgccgcgctgcaagaggtcaccggcgttgcccatgttctgaaa
tccgcctcgggccgcgcccgcgcgctcgaaggactcgacgatgccagcggcccgctggct
ggtgccccccccgcccggattgcggtgcccatgaccggggcgacctacatcgccgacctc
gccggcggccagaaaaccgggctcttctacgaccagcgccccaaccacgccttcgccgcc
cggttcgcaaagggcgcgcgggtgctcgatgtcttctcccatgtcggcgggtttgccctg
gcggcgctggccgcaggggcccagagcgcgctggccgtggacggctccgccccggcgctg
gccctggccgaggaaggcgccgccgccaccggcgtggccgaccgcttcgccacccgcaaa
tccgacgccttcgcagcacttgaaaccctcgccaccgagggcgcgcaattcgacctggtg
atctgcgacccgcccgcctttgcgcccgcgaaatccgccctgggccagggcctgcgcgcc
tacgagcgtgtcgcgcgcctcgcggctccgcttgtcgcaccgggcggcgcgctgatgtta
tgctcctgctcccacgcggccgagcttgcgaaattccgcgccgcctgcctgcgcggcgtc
gggcgcgcgggccgagcaagccagatcgtctataccggcggcgcaggtcccgaccacccg
ctgcatccacagctgggcgagaccggctatctcaagacgctgatgctccgcctgctgcca
tga
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