Dinoroseobacter shibae: Dshi_1804
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Entry
Dshi_1804 CDS
T00612
Name
(GenBank) putative competence protein
Organism
dsh
Dinoroseobacter shibae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Competence
DUF4131
Motif
Other DBs
NCBI-ProteinID:
ABV93546
RoseoBase:
Dshi_1804
UniProt:
A8LMK1
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Position
complement(1875927..1878011)
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AA seq
694 aa
AA seq
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MTQYAEVRQVLFPWAPVVLGCGMLAYFLPAGEPSLAVLRLVWSCAAFGLLWGLFAPWSLR
PLGWALALAAGGYGLAAWRTADVAASVLPFRYYGPIEGRIVEIDSSYAGAMRLTLADVRL
EDVAPDRRPAQVRVSLHGPLPEVPLRPGQVVMTTGHLSPPNAPVEPGGFDFRRHAWFEGL
GAVGYTRVPVVLWAEPAQLSFAERVYETRLKLSKAIRDRIAGQPGAFASAIITGDRAAID
RAHVEDLRGSNLAHLLAISGLHMGLLTGTVFLGLRSLMALWPWLALRVPVKKVAAVCALG
AAVVYLFISGMSVATERAFIMVAMILVGVCFDRRALSLRSVAWAALLVLALRPEAVLGPG
FQMSFAATTALVITYAHLRDVRWWRGIPKWAKGTASLLLSSAVAGAATAPIAAAHFNIVG
HYGLIANLASVPVMGTLVMPGALVALAGVPLGLEGVGLFAMEVGIRWILWVAGTVAGLEG
AVGHVVRPMPVVLPLIVLGALVVGLLPWRARWAGLAPVVLALGLWTQSDRPELLISDTGG
LLGVMTEQGRALSKGRGDGFAARNWLENDGDGVTQDVAAARAGIEAGKGTVSVALGPYRV
IQLRGKTGAAQFPEACATADLVVANTRLPRSTGACESIDAWDLRRTGALAVSVTEDGLQV
VRAKSAEEQRMWTGAARATTPGRLARAPGAEPTR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgacccaatacgcagaggtacggcaggtgctgttcccctgggcccccgtggtgctgggc
tgcgggatgctggcctattttctgcccgcgggcgagccgtccctggcggtgctgcggctg
gtgtggtcctgtgctgccttcggcctgctctgggggctctttgcgccctggtccctgcgg
cccctgggctgggcgctggcgctggcggcggggggctacgggctcgcggcctggcgcacg
gcggatgtggccgcctcggtgctgccctttcgctattacgggccgatcgaggggcgcatc
gtcgagatcgacagctcctatgccggggcgatgcgcctgaccctcgcggatgtgcggctg
gaggatgtcgcgcccgaccgccgcccggcgcaggtgcgggtgtcgctccacgggccgttg
cccgaggtgccgctacgcccgggccaggtcgtgatgaccaccgggcatctgtcgccgccc
aacgcgccggtggagccgggcggcttcgactttcgccgccatgcctggttcgaggggctg
ggggccgtgggctacacccgcgtgcccgtggtcctctgggcggagcctgcgcagctgagc
ttcgccgagcgtgtctacgagacccggctgaagctgtccaaggcgatccgcgaccggatc
gcgggccagcccggggccttcgcctcggcgatcatcaccggcgaccgggcggccatcgac
cgcgcccatgtcgaagacctgcgcggctcgaaccttgcccatctgctggcgatctccggc
ctgcatatggggttgctcacgggtacggtgtttctgggcctgcgcagtctaatggcgctg
tggccctggctggcgctgcgcgtgccggtcaagaaggtggcggcggtctgcgccctgggc
gcggcggtcgtctacctgttcatctcgggcatgagcgtggcgacggagcgggccttcatc
atggtggcgatgatcctggtgggcgtgtgtttcgaccgccgggcgctgtccctgcgttcg
gtcgcctgggcggcgctgctggtgctggcgctcaggcccgaggcggtgctgggcccgggg
ttccagatgtcgtttgccgcgaccacggcgctggtcatcacctatgcccatctgcgcgat
gtgcgctggtggcggggcattccgaaatgggccaaggggacggcctcgctcttgctgtcc
tcggcggtggcgggggcggccacggcccccattgcggcggcgcatttcaacatcgtcggc
cattacgggctgatcgcgaacctggcctcggtgccggtcatgggcacgctggtgatgccc
ggcgcgctggtggcgctggcgggcgtgcccctggggctggagggggtcggtctcttcgcg
atggaggtcgggatccgctggatcctctgggtggccggcacggtcgcggggctggagggg
gcggtgggccatgtggtccgcccgatgcccgtggtgctgccgttgatcgtgctgggagcg
ctggtggtggggcttttgccctggcgggcgcgatgggcggggctggcgccggtggtgctg
gccctggggctctggacccagtccgaccggccagagctgctgatctccgacacgggcggg
ctgctgggcgtgatgaccgagcagggacgcgcgctcagcaagggccgcggtgacgggttc
gcggcgcgcaactggctggagaatgacggcgacggggtgacgcaggacgtggcggcggcg
cgcgcggggatcgaggcgggcaaggggacggtcagcgtggccctcgggccctaccgggtg
atccagctgcgcggcaagaccggtgcggcgcagtttccggaggcctgtgccacggcggac
ctggtggtggccaacacgcggctgccgcgcagcaccggggcctgcgagagcatcgacgcc
tgggatctgcgccggacaggtgcgctggcggtgtcggtgaccgaggacgggttgcaggtg
gtccgcgcgaagtccgcagaagagcagcggatgtggaccggggccgcacgtgcgaccacg
ccgggccgcctggcccgcgcgccgggcgcggagccgacccgctga
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