KEGG   Dinoroseobacter shibae: Dshi_1811
Entry
Dshi_1811         CDS       T00612                                 
Symbol
lpdV
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh00010  Glycolysis / Gluconeogenesis
dsh00020  Citrate cycle (TCA cycle)
dsh00260  Glycine, serine and threonine metabolism
dsh00280  Valine, leucine and isoleucine degradation
dsh00310  Lysine degradation
dsh00380  Tryptophan metabolism
dsh00620  Pyruvate metabolism
dsh00630  Glyoxylate and dicarboxylate metabolism
dsh00640  Propanoate metabolism
dsh00670  One carbon pool by folate
dsh00785  Lipoic acid metabolism
dsh01100  Metabolic pathways
dsh01110  Biosynthesis of secondary metabolites
dsh01120  Microbial metabolism in diverse environments
dsh01200  Carbon metabolism
dsh01210  2-Oxocarboxylic acid metabolism
dsh01240  Biosynthesis of cofactors
Module
dsh_M00009  Citrate cycle (TCA cycle, Krebs cycle)
dsh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
dsh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
dsh_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    Dshi_1811 (lpdV)
   00020 Citrate cycle (TCA cycle)
    Dshi_1811 (lpdV)
   00620 Pyruvate metabolism
    Dshi_1811 (lpdV)
   00630 Glyoxylate and dicarboxylate metabolism
    Dshi_1811 (lpdV)
   00640 Propanoate metabolism
    Dshi_1811 (lpdV)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    Dshi_1811 (lpdV)
   00280 Valine, leucine and isoleucine degradation
    Dshi_1811 (lpdV)
   00310 Lysine degradation
    Dshi_1811 (lpdV)
   00380 Tryptophan metabolism
    Dshi_1811 (lpdV)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    Dshi_1811 (lpdV)
   00670 One carbon pool by folate
    Dshi_1811 (lpdV)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dsh04147]
    Dshi_1811 (lpdV)
Enzymes [BR:dsh01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     Dshi_1811 (lpdV)
Exosome [BR:dsh04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   Dshi_1811 (lpdV)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA FAD_oxidored NAD_binding_8 HI0933_like DAO Thi4 FAD_binding_3 2-Hacid_dh_C AlaDh_PNT_C Lys_Orn_oxgnase 3HCDH_N HU-DNA_bdg Lycopene_cycl Trp_halogenase
Other DBs
NCBI-ProteinID: ABV93553
RoseoBase: Dshi_1811
UniProt: A8LMK8
LinkDB
Position
complement(1887561..1888958)
AA seq 465 aa
MAETSFDMVVVGAGPGGYVAAIRAAQLGLKVAIVEREHMGGICLNWGCIPTKAMLRSSEV
FHLMHRAKEFGLKADGVGYDLDAVVARSRAIAKQLNSGVSHLMKKNKVTVVMGEASLPAK
GTVAVKTDKGTETLRAPHVVLATGARARELPGLEADGDLVWTYKHALTPKRMPKKLLVIG
SGAIGIEFASFYNTLGTETTVVEVMDRILPVEDAEISGFAKKQFEKQGMTIREKAMVKSL
ERGKGTVTAQIEQGGKTTAETFDTVISAVGIVGNTEKLGLEALGVRVEKTHVVTDAYCRT
GVEGLYAIGDLAGAPWLAHKASHEGVMVAELIAGRNDVHPVTPDSIAGCTYCQPQIASVG
MTEAQAKEAGHKIKVGRFPFIGNGKAIALGEPEGMIKTVFDAGTGELLGAHMVGAEVTEL
IQGYVVGRQLETTEEDLMNTVFPHPTLSEMMHESVLDAYGRALHF
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggctgagacatcctttgacatggtggtggtcggagccgggccgggcggctacgtcgcg
gcgatccgggcggcccagctcgggctcaaggtcgcgatcgtcgagcgcgagcatatgggc
ggcatctgcctcaactggggctgcattccgaccaaggcgatgctgcgcagctccgaggtg
tttcacctgatgcaccgcgccaaggagttcgggctgaaggcggacggggtcggctacgac
ctcgacgccgtggtcgcgcgcagccgggcgattgccaagcagctcaattccggtgtctcg
cacctgatgaagaagaacaaggtcaccgtggtcatgggcgaggccagtctgcccgccaag
ggcacggttgccgtcaagaccgacaagggcaccgagaccctgcgcgcgccccatgtcgtg
ctggccaccggcgcgcgggcccgcgagctgccggggctggaggccgatggcgatctggtc
tggacctacaagcacgcgctgacgcccaagcggatgccgaagaagctgctggtgatcgga
tcgggggccatcgggatcgaattcgccagcttctacaataccttggggaccgagacgacc
gtggtcgaggtgatggaccggattctgccggtcgaagatgccgagatcagcggctttgcc
aagaagcagttcgagaagcagggcatgaccatccgcgagaaggccatggtcaagagcctc
gagcgcggcaagggcacggtgaccgcgcagatcgagcagggcggcaagaccaccgccgag
acattcgacaccgtgatttccgccgtggggatcgtcggcaataccgaaaagctggggctg
gaggcgctcggcgtccgggtcgagaaaacccatgtggtcacggacgcctattgccggacg
ggcgtcgaggggctctatgccatcggcgatctggccggtgcgccctggctggcgcacaag
gccagccacgagggcgtgatggtggccgaactgatcgccggcaggaacgacgtgcatccg
gtcaccccggacagcattgcgggctgcacctattgccagccccagatcgccagcgtcggc
atgaccgaggcccaggcgaaagaggccgggcacaagatcaaggtcggccgctttccgttc
atcggcaacggcaaggccatcgccctgggcgagccggagggcatgatcaagaccgtgttc
gacgcgggcacgggcgagttgctgggcgcgcatatggtgggcgccgaagtcaccgagctg
atccagggctatgtggtgggtcggcagttggagaccaccgaggaggacctgatgaacacg
gtcttcccgcaccccacgctcagcgagatgatgcacgagtcggtgctcgacgcctacggc
cgcgccctgcatttctga

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