Dinoroseobacter shibae: Dshi_1864
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Entry
Dshi_1864 CDS
T00612
Name
(GenBank) putative membrane-bound lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsh01011
]
Dshi_1864
Enzymes [BR:
dsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Dshi_1864
Peptidoglycan biosynthesis and degradation proteins [BR:
dsh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Dshi_1864
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Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
DUF6197
Motif
Other DBs
NCBI-ProteinID:
ABV93606
RoseoBase:
Dshi_1864
UniProt:
A8LN93
LinkDB
All DBs
Position
1942814..1943926
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AA seq
370 aa
AA seq
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MTRITRRTFGAGATALALAGCGGARVPAAGPADDLRPVPNAGYADWVARYRARAAADFSD
DLLRRAFAGTGYLPGVVARDRNQVEFRRTLEDYLAIAVSDERVARGRAAVAQYRPTLAAI
EDRYGVPPELVTAIWGLESFYGDRKGDIPVVSATSTLAYDGRRGAFFEGQLTAALRILRA
GDIPADRLVGSWAGAMGHTQFIPTSFEAFAVDFTGDGRRDIWSDDPTDALASAAAYLDRN
GWTRGLRWGAEDPEGSLQPQPGGPRFATTSNFNVIKRYNNSDAYAIGVGHLSERIAGGGP
LRTPFPPDANGLTKADRVTLQEGLTRAGFDTGGADGVVGPNTEAAIRAYQRARGLPVTGV
PSMEMVRAVR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgacacggatcaccagacgaaccttcggcgccggggcaacggccctggctctagcgggc
tgcggcggggcacgggtgcccgcggcggggccggcggacgatctgcgacccgtgccgaat
gcgggctatgcggactgggtggcgcggtaccgggcgcgggcggcggcggatttctcggac
gacctgctgcggcgggcttttgcggggacgggctacctgcccggcgtggtggcgcgggac
cgcaaccaggtggagtttcgccggaccctggaggattacctggccatcgccgtgtcggac
gagcgggtggcgcgggggcgggcggcggttgcgcaataccgccccactttggctgcgatc
gaggaccgttacggcgtgccgccggagttggtcacggcgatctgggggctggagagcttc
tatggcgaccgcaagggggatatccccgtggtctcggcgacctcgacgctggcctatgac
gggcggcggggggcgttcttcgaggggcagctgaccgcggcgctgcgcatcctgcgggcc
ggggatatcccggcggaccggctggtgggcagctgggcgggcgcgatgggacatacgcag
ttcatccccacatcgttcgaggccttcgcggtggatttcaccggcgacgggcggcgggac
atctggtccgacgatcccacggacgcgctggcatcggcggcggcgtatctggaccgcaac
ggctggaccagggggctgcgctggggcgcggaagatccggagggcagcctccagccgcaa
ccgggggggccgcgtttcgccaccacgtcgaatttcaacgtgatcaagcgctacaacaac
tcggacgcctacgcgatcggggtcgggcacctgtcggaacggatcgcgggcggcggtccc
ctgcgcacgccgtttccgcccgacgccaacgggctgaccaaggcggaccgggtgactctg
caagaagggctgacacgggcggggtttgatacgggtggtgcggacggcgtggtgggcccg
aacaccgaagccgcgatccgggcgtaccagcgcgcccggggcctgccggtgacgggggtg
ccttcgatggagatggtaagggcggtgcggtga
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