Dinoroseobacter shibae: Dshi_1938
Help
Entry
Dshi_1938 CDS
T00612
Symbol
truA
Name
(GenBank) pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsh03016
]
Dshi_1938 (truA)
Enzymes [BR:
dsh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Dshi_1938 (truA)
Transfer RNA biogenesis [BR:
dsh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Dshi_1938 (truA)
Prokaryotic type
Dshi_1938 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ABV93679
RoseoBase:
Dshi_1938
UniProt:
A8LNZ7
LinkDB
All DBs
Position
2027520..2028293
Genome browser
AA seq
257 aa
AA seq
DB search
MPRFALKIEYDGAPFAGWQRQREQPSVQGAVEAALRGLQPDHAGIAAAGRTDAGVHALGQ
VAHVDLARDWDPFRLSEALNAHLRPAPVAVLAAARVGEDFHARFSALERSYLFRLLVRRA
PATHDAGLVWRVMNPLDVEAMREGAKYLIGKHDFTTFRSTMCQAASPVKTLDEITIEESP
RDAGTEFRFHLRARSFLHNQVRSIVGTLERVGAGAWDPADVKTALEARDRAACGPVCAPQ
GLYLRAVRYPEDPFKPA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgccgagatttgccctgaaaatagagtatgatggcgcccctttcgcgggctggcagcgc
cagcgcgaacagccctccgtgcaaggcgcggtggaggcggcgttaaggggtctgcagccc
gatcatgccgggatcgcggcggcggggcggacggatgcgggggtgcatgcgctgggtcag
gtggcccatgtggatctggcgcgcgactgggatccgttccggctgtccgaggcgctgaac
gcccatctgcgaccggcgccggtggcggtgctggcggcggcgcgggtgggggaggatttt
catgcgcgattctcggcacttgagcggtcgtacctcttccgtctcctggtgcggcgcgcg
ccggcgacccatgacgcggggctggtgtggcgggtgatgaatccgctggatgtcgaggcc
atgcgcgaaggggccaagtacctgatcggaaagcatgatttcacgactttccggtcgacc
atgtgccaggcggcctcgccggtcaagacgctcgacgagatcacgatcgaggagagcccc
cgggacgcgggcacggagttccggttccaccttcgggcgcgaagtttcctgcataatcaa
gtccgtagcatcgtcggcaccctggagcgcgtcggcgccggagcgtgggatccggctgat
gtgaagaccgcgctcgaggccagggacagggcggcttgcgggccggtctgcgcgccccag
gggctctatttgcgcgccgtgcgctaccccgaagacccgttcaaaccggcgtaa
DBGET
integrated database retrieval system
