Dinoroseobacter shibae: Dshi_1977
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Entry
Dshi_1977 CDS
T00612
Name
(GenBank) periplasmic binding protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
dsh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_1977
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dshi_1977
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_1977
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Dshi_1977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
ANF_receptor
Peripla_BP_5
Motif
Other DBs
NCBI-ProteinID:
ABV93716
RoseoBase:
Dshi_1977
UniProt:
A8LP34
LinkDB
All DBs
Position
complement(2090945..2092207)
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AA seq
420 aa
AA seq
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MKTTTLARTGLMLGAALGVLVTAGAASACTTKIGAVLPTSVDWGKPIAATAQFAVDQVNE
AGGVNGCQIEMVLRDTQVDPKVGVDAAKALVDLDGVRVLLGAVSSGVSMPILTSVTLPAG
VMQMSCCSSSTAFTQLAAEGKTEGLWFRTFATSGVQAAMGAKVAADRGYKSVAIFYKNDD
WGQDIGKLVAADLEALGIEVTGSVALNDGQPSYRAEVTEALQGQPEAIYLALYPKEGIAA
VREWLSLGGTQNMIVANSLKSDEFAENVGLQFLGNTLGTDTASPRAESADAFVTRYTERF
ESAPTGPGLANSYDATMIALLAMQAAGEGASGAEIAAQVGRVTNPEGTPISADGAGFAAA
VEVLSSGGDVFYQGATGNVQFDENGDVSAPAVIWSFTEEGITEQEYISLDEVNAFMASLK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaccactctcgcccggacggggctcatgctcggggctgccctcggcgtgctc
gtcaccgccggggccgccagtgcctgcaccaccaagatcggcgcggtgctgccgacctcc
gtcgactggggcaagcccatcgcggccacggcacaatttgctgtcgatcaggtaaacgag
gcgggcggtgtgaacggctgccagatcgagatggtgctgcgcgacacccaagtcgacccg
aaggtcggcgtggacgcggccaaggcgctggtggatctcgacggggtgcgggtgctgctg
ggcgcggtgtcgtcgggtgtgtcgatgccgatcctgacttcggtgaccttgcctgcgggc
gtgatgcagatgtcgtgctgttcgtcctccaccgccttcacccaactcgccgccgagggc
aagaccgaggggctgtggttccgcacctttgccacgtcgggcgtgcaggcggccatgggc
gccaaggtggccgcggaccggggctacaaatccgtggcgatcttctacaagaacgacgac
tggggccaggacatcggcaagctggtggccgcggatctcgaagcgctggggatcgaggtc
acggggtcggtcgcgctgaatgacggccaaccttcctaccgcgccgaggtgaccgaggcg
ctgcagggccagccggaggcgatctatcttgcgctttatcccaaggaggggatcgcggcg
gtgcgcgaatggctgtcgctcggcgggacgcagaacatgatcgtggcgaattccctgaag
tccgacgagtttgccgagaatgtcgggctgcaattcctgggcaacaccctgggcaccgac
accgcctcgccgcgcgcagagtccgcggatgccttcgtgacccgctataccgaacggttc
gagagcgcgccgaccggcccgggcctcgccaacagctatgacgcgacaatgatcgcgctt
ctggcaatgcaggcggcgggcgagggggcctcgggcgccgagatcgccgcgcaagtgggc
cgtgtgaccaaccccgaaggcacaccgatcagcgccgatggcgccggtttcgccgcggct
gtcgaggtgctcagcagtggcggcgacgtgttctaccagggcgcgaccgggaacgtgcag
ttcgacgagaacggcgacgtgtcggcccctgcggtgatctggagctttaccgaagagggc
atcacggagcaggaatacatctccctcgacgaggtgaacgccttcatggcgtcgttgaag
tga
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