KEGG   Dinoroseobacter shibae: Dshi_1977
Entry
Dshi_1977         CDS       T00612                                 
Name
(GenBank) periplasmic binding protein
  KO
K01999  branched-chain amino acid transport system substrate-binding protein
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh02010  ABC transporters
dsh02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    Dshi_1977
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Dshi_1977
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:dsh02000]
    Dshi_1977
Transporters [BR:dsh02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    Dshi_1977
SSDB
Motif
Pfam: Peripla_BP_6 ANF_receptor Peripla_BP_5
Other DBs
NCBI-ProteinID: ABV93716
RoseoBase: Dshi_1977
UniProt: A8LP34
LinkDB
Position
complement(2090945..2092207)
AA seq 420 aa
MKTTTLARTGLMLGAALGVLVTAGAASACTTKIGAVLPTSVDWGKPIAATAQFAVDQVNE
AGGVNGCQIEMVLRDTQVDPKVGVDAAKALVDLDGVRVLLGAVSSGVSMPILTSVTLPAG
VMQMSCCSSSTAFTQLAAEGKTEGLWFRTFATSGVQAAMGAKVAADRGYKSVAIFYKNDD
WGQDIGKLVAADLEALGIEVTGSVALNDGQPSYRAEVTEALQGQPEAIYLALYPKEGIAA
VREWLSLGGTQNMIVANSLKSDEFAENVGLQFLGNTLGTDTASPRAESADAFVTRYTERF
ESAPTGPGLANSYDATMIALLAMQAAGEGASGAEIAAQVGRVTNPEGTPISADGAGFAAA
VEVLSSGGDVFYQGATGNVQFDENGDVSAPAVIWSFTEEGITEQEYISLDEVNAFMASLK
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgaaaacgaccactctcgcccggacggggctcatgctcggggctgccctcggcgtgctc
gtcaccgccggggccgccagtgcctgcaccaccaagatcggcgcggtgctgccgacctcc
gtcgactggggcaagcccatcgcggccacggcacaatttgctgtcgatcaggtaaacgag
gcgggcggtgtgaacggctgccagatcgagatggtgctgcgcgacacccaagtcgacccg
aaggtcggcgtggacgcggccaaggcgctggtggatctcgacggggtgcgggtgctgctg
ggcgcggtgtcgtcgggtgtgtcgatgccgatcctgacttcggtgaccttgcctgcgggc
gtgatgcagatgtcgtgctgttcgtcctccaccgccttcacccaactcgccgccgagggc
aagaccgaggggctgtggttccgcacctttgccacgtcgggcgtgcaggcggccatgggc
gccaaggtggccgcggaccggggctacaaatccgtggcgatcttctacaagaacgacgac
tggggccaggacatcggcaagctggtggccgcggatctcgaagcgctggggatcgaggtc
acggggtcggtcgcgctgaatgacggccaaccttcctaccgcgccgaggtgaccgaggcg
ctgcagggccagccggaggcgatctatcttgcgctttatcccaaggaggggatcgcggcg
gtgcgcgaatggctgtcgctcggcgggacgcagaacatgatcgtggcgaattccctgaag
tccgacgagtttgccgagaatgtcgggctgcaattcctgggcaacaccctgggcaccgac
accgcctcgccgcgcgcagagtccgcggatgccttcgtgacccgctataccgaacggttc
gagagcgcgccgaccggcccgggcctcgccaacagctatgacgcgacaatgatcgcgctt
ctggcaatgcaggcggcgggcgagggggcctcgggcgccgagatcgccgcgcaagtgggc
cgtgtgaccaaccccgaaggcacaccgatcagcgccgatggcgccggtttcgccgcggct
gtcgaggtgctcagcagtggcggcgacgtgttctaccagggcgcgaccgggaacgtgcag
ttcgacgagaacggcgacgtgtcggcccctgcggtgatctggagctttaccgaagagggc
atcacggagcaggaatacatctccctcgacgaggtgaacgccttcatggcgtcgttgaag
tga

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