Dinoroseobacter shibae: Dshi_1978
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Entry
Dshi_1978 CDS
T00612
Name
(GenBank) putative branched-chain amino acid transport system / permease component
KO
K01998
branched-chain amino acid transport system permease protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
dsh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_1978
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dshi_1978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_1978
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Dshi_1978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ABV93717
RoseoBase:
Dshi_1978
UniProt:
A8LP35
LinkDB
All DBs
Position
complement(2092224..2093177)
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AA seq
317 aa
AA seq
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MIGLVSYLVFFATIASILAIAVLGLNLHWGNTGLFNGGVVAFFGAGGYATLILGGTPQAA
HLGGFGLPYGLALLGGLVIAGLLAWLVGLLTIRLRHDYLAIATFGVAVAFENLVRNAQRL
AGGASGLRGFERPLADTIPPGLAYNAAFFAFVLAALIATYLGLERLIRGPFGRLLRAIRE
DETAARALGKSPDRIRLTAFVIGSVILGLAGALYATFYAFISPQDVLPILTFQIWAMLIV
GGAGNNRGAIAGAFLIWGAWTASGWALSRFAPIEVQLYTGSIQFVLIGCVIVGMLLWRPQ
GLFPERLVVSQSGQTDR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggctggtgtcctacctggtgttcttcgcgaccatcgccagcatcctggcgatc
gcggtgctggggctgaacctgcactggggcaatacggggcttttcaacgggggcgtcgtg
gccttcttcggggcgggcggctacgccacgctgatcctcggcggcacgccccaggcggcg
catctcggcggcttcgggctgccctacgggctggcgctgctcggcgggctcgtgatcgcg
ggcctcctcgcctggctcgtcgggttgctgaccatccggctcaggcatgactacctcgcc
atcgccaccttcggggtcgcggtcgccttcgagaacctggtgcgcaacgcgcaaagattg
gccggcggcgcctcgggcctgcgggggttcgagcgtccgctcgccgacacgatcccgccg
gggctggcctataacgcggccttcttcgccttcgtgctcgccgccctgatcgccacctat
ctcgggctcgagcgcctgatccgcggcccgttcggacggctgctgcgcgcgatccgcgag
gatgaaacagccgctcgggcccttggcaaatcccccgaccggatccgcctgaccgccttc
gtgatcggctcggtgatcctggggctggcgggcgcgctctatgccaccttctacgccttc
atcagtccgcaggatgtcctgccgatcctgaccttccagatctgggcgatgctgatcgtc
ggcggtgccggcaacaatcgcggcgccatcgcgggggcgttcctgatctggggcgcctgg
accgccagcggatgggcgctgtcgcgcttcgcaccgatcgaggtccagctttacactgga
tcgatccagttcgtgctgatcggatgcgtcatcgtgggcatgttgctctggcggccccaa
ggcctcttcccagagcggctggttgtgtcacaatccggccaaaccgacagataa
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