Dinoroseobacter shibae: Dshi_2023
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Entry
Dshi_2023 CDS
T00612
Name
(GenBank) putative ABC transporter permease component
KO
K02011
iron(III) transport system permease protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_2023
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_2023
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Iron(III) transporter
Dshi_2023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ABV93762
RoseoBase:
Dshi_2023
UniProt:
A8LPQ8
LinkDB
All DBs
Position
complement(2142820..2144499)
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AA seq
559 aa
AA seq
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MATLSDPSGERPVKSRARKRREARLLGTGALVLAALCLLPMLAVLITALSGGTDTLAQLA
DTVLPGYTGATLALVVLVGTGTFMIGTSTAWLISMYEFPGRRWLEVLLVLPLAFPAYVLA
YAYTHVLDHPGIVQATLRSVMGWGPRDYWFPEIRSLGGAAAMLILVLYPYVYLLARAAFV
QQSATTFFAARALGRTPFRAFLEVSMPMARPAIAAGVLLATMETIADFGTVSYFGVHTFA
TGIYTSWFNMGDRVAASQLALGLLGFALLLAVLERQSRGSAKYHGGKRQEAMPRTTLTGW
HRWSATILCGAPVLLGVAIPIVTLLVMGIGSEQNLLSRRYIRFITNSLTLASAAAVLTVC
AAVILGYYQRVRPGPRSDAALYIARLGYAIPGGVIAVGLLVPFALFDNTLDAWMRANFDL
STGLLLTGSIWLLVGAYMIRFLAAALGAYEGGQATINLNLDYAARVLGQTAYGTLRRVHL
PILTPSLLTALLIVFVDVMKELPATLIMRPFNYDTLAVQAYRLASDERLEGAAVPSLLIV
AVGLLPVILLCRQVRRQSR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctgtccgatccctctggcgagcgtcccgtgaaaagccgtgcccgcaagcgc
cgcgaggcccggctgctgggcacgggcgcgctcgtgctcgcggcgctctgcctgctgccc
atgctcgcggtcctgatcacggcgctgtcgggggggaccgataccctggcccaactcgcc
gacaccgtgctgcccggctataccggcgcaaccctggcgctggtggtgctcgtcggcacc
ggcaccttcatgatcgggacctccacagcctggctcatatcgatgtacgagttccctggt
cgccgctggctggaggtgctgctggtcctgccgctggcctttccggcctatgtgctggcc
tatgcctatacccatgtgctcgaccatcccggcatcgttcaggcgacgctgcgatcggtg
atgggctggggaccgcgcgactactggtttcccgagatccgctcgctgggcggggctgcg
gccatgctgatcctcgtgctctacccgtatgtctatctgctcgcccgcgcggctttcgtg
cagcagagcgccaccactttctttgccgcccgcgccctgggccgcacgcctttccgcgcc
ttcctggaggtctccatgcccatggcgcgccctgccatcgccgcgggcgtcctgctggcc
accatggagaccatcgccgatttcggcaccgtgtcctatttcggcgtccataccttcgcc
acgggcatctataccagctggttcaacatgggggaccgggtggccgcgtcccagcttgcc
ctcgggcttctgggcttcgcgctcctgctcgcggtgctggagcgtcaaagccgcggttct
gccaagtaccacggcggcaagcggcaggaggccatgccccgcaccaccctgaccggctgg
caccgctggagcgcgacgatcctgtgcggcgcgccggtgcttctcggcgtggccatcccg
atcgtcaccctgctggtcatgggcatcgggtccgagcagaacctgctcagccgccgctac
attcgtttcatcacgaattccctgaccctggcctcggcggcggcggttctgacggtctgc
gcggcggtgatcctggggtactaccaacgcgtccgccccggcccgcgctcggacgcggct
ctctatatcgcgcggctcggctacgcgatcccgggcggggtgatcgcggtagggcttctg
gtgcccttcgcgctcttcgacaacacgctcgatgcctggatgcgcgccaatttcgacctc
tccacggggctgctgctgaccggatcgatctggcttctggtgggggcctacatgatccgg
tttctcgccgcggcgctgggcgcctacgagggcggacaggcgacgatcaacctcaatctc
gactatgccgcgcgggtgctgggccagaccgcctacggcaccctgcgtcgggtgcacctg
ccgatcctgacgccaagcctgctgacggcgctgctgatcgtgttcgtcgacgttatgaag
gaattgcccgcgacgctcatcatgcggcccttcaactacgacacgctggcggtgcaggcc
taccggctggcctcagacgaacggctcgaaggggcggccgtgcccagcctgctgatcgtg
gccgtggggctcttgccggttatcctgctctgccgccaggtccgccgccaatcgcgctga
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