Dinoroseobacter shibae: Dshi_2048
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Entry
Dshi_2048 CDS
T00612
Name
(GenBank) hypothetical protein
KO
K02067
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_2048
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_2048
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
gamma-Hexachlorocyclohexane transporter
Dshi_2048
Phospholipid transporter
Dshi_2048
Mce system transporter
Dshi_2048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MlaD
DUF948
ATG17_like
COG6_N
DUF3450
Dor1
LPP
Motif
Other DBs
NCBI-ProteinID:
ABV93785
RoseoBase:
Dshi_2048
UniProt:
A8LPT1
LinkDB
All DBs
Position
complement(2167769..2169508)
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AA seq
579 aa
AA seq
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METRANYILIGLFTLLGILGMMAFFLLFARVELDRQFAYYDIRFSSVSGLSEASDVRFSG
LPVGQVVDVRLAPEQDGSIVVRVEVNADTPVRTDSVATIEAQGVTGVSFVGISGGTPDAP
LLVAATDAQVPEIEAGRSVLQTLSEDAPELITEALQIVQEVSALLTDDNRNLLRNILVNT
EAASEEFASALENFSGVADTVNAFADQISRFNATLDTLTGEINDVLSTADTTLASIGALS
EETRRMVLDGEEVLSTLDDSLGAAQTYIEGDLAGATEEARALMADLRAQADTLGTEAAAL
IEGFGATGDVATARLTEFAGTLAAVDRLVASLEATSGEVQVAVRRIDGLVAEEGAPLLSE
TRALVATAQAAMEAVNAVATVDMPAIVADIRAATDTTTRVVAEVGENLSGASGRVEALIV
SAHSTLADVTTTFRNANETLTAVNTAMETGDSALRAAESAFTSADRVMSEDLDGVIAALE
STLGSLTGAVDSVAEDLPLISSDLRSASDAAARAFAEVEALAEAAGPRLETFATTGLPLY
SRLAQEARVLVENLDRLTNQISRDPARFILNPNTPEFRR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
ttggaaacgcgtgccaattacatcctgatcgggcttttcacgctgctgggcatcctcggc
atgatggcctttttcctgctgttcgcgcgggtcgagctggaccggcaattcgcctattac
gacatccggttttcctcggtctctgggttgagcgaggcgtcggacgtacggttcagcggc
ttgcccgtggggcaggtggtcgatgtacggctggccccggagcaggacggctcgatcgtc
gtgcgggttgaggtgaatgccgacacgccggtgcgcacggacagtgttgcgacgatcgag
gctcagggggtcacgggcgtgtccttcgtcgggatcagtgggggaacgccggacgcgccg
cttctggtggcggccaccgacgcgcaggtgcccgagatcgaggccgggcgctcggtgctg
cagaccctgtctgaggacgcgcccgagctgatcaccgaggcgctgcagatcgtgcaggag
gtcagcgcactgctgaccgacgacaatcgcaacctgctgcgcaatatcctggtcaatacc
gaggcggcctcggaagaattcgccagcgcgttggagaatttctccggcgtggccgatacg
gtgaacgcctttgccgaccagatcagccggttcaacgccacgctcgataccctgacggga
gagatcaacgacgtgctttccacggccgacacgacgctggcctccatcggagccttgtcg
gaggagacgcgccggatggtcctcgacggtgaggaggtgctgtcgacgctcgacgattcc
ctgggggccgcgcagacctatatcgaaggtgatttggccggtgcgaccgaggaggcccgg
gcattgatggccgatctgcgggcgcaggccgacaccctgggcaccgaggctgcggcgctg
atcgaggggttcggcgcgaccggcgacgtggccacggcccggcttacggagtttgcgggc
acgctggcggcggtggatcggctggtcgcctcactggaggcaacctcgggcgaggtccag
gtggccgtgcggcgcatcgacgggctggttgcggaagagggcgcaccgctgctgagcgag
acgcgcgcgctggtcgcaacggcgcaggcggcgatggaggcggttaacgcggtggcgacc
gtggacatgcccgccatcgtggccgatatccgcgccgcgaccgacaccacgacccgggtg
gtcgccgaggtaggcgagaacctgagcggcgcgtcgggccgggtggaggcgctgatcgtg
tcagcgcactccaccctcgccgatgtcaccaccaccttccgcaatgccaacgagaccctc
acggcggtgaacaccgcgatggagactggcgacagcgccctgcgcgccgccgagagcgcc
tttacctccgccgatcgggtgatgagcgaggatctcgacggggtcatcgccgcgctggag
agcacgcttggctcgctgaccggggcggtggacagcgtagcagaggacctgccgctgatc
agttcggatctgcgcagcgccagcgatgccgccgcgcgggcctttgccgaggtggaggcg
ctggccgaggcggccgggcccaggctggagactttcgcgaccaccggcctgccgctttat
tcccggctcgcgcaggaagcgcgcgtgctggtcgaaaacctcgaccggctgaccaaccag
atcagccgcgatcccgcgcggttcatcctcaaccccaacaccccggaattcagaaggtag
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