Dinoroseobacter shibae: Dshi_2123
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Entry
Dshi_2123 CDS
T00612
Name
(GenBank) hypothetical protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_2123
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_2123
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
Dshi_2123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ABV93859
RoseoBase:
Dshi_2123
UniProt:
A8LQJ2
LinkDB
All DBs
Position
complement(2253645..2254763)
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AA seq
372 aa
AA seq
DB search
MPTNLIRPSRRSLLKMTGAAALATPFLSIRAAAQTTELSMLAWYGHAEPDIVGAFEEANN
VKFVPKYYTGGDNMLGLIAQSPRGTFDVILSDAEYVQQLNAAGFIEELDPADYAFDDFFP
EFQKFPGHWQDDKLFSVITRFGFLGVAYNTDAFTAEEASSYDLFADERLTGKLGHFDWHL
PNLGQMSLHVGNASPYDIDEAAWERVQEHTMGLRRQAGGFFDYGGTFSSLDNGQMLAFAG
IGDWITGTLEKNGSPVRSVIPEQGGLQWTESFSIGKGSRNQEMAKKWIQYITSPEGQAKS
ADMAAYPAIVPSQAGWKVLNDTNPAEARRQNMVLGERNAMDMIREGLIQYRQLPVQQSLE
DWNDFWSDYKGA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccaacctgatccggcccagtcgccgcagcctgttgaagatgaccggcgccgcg
gctctcgccacgccgtttctgtcgatccgtgccgccgcgcaaacgaccgagctgtcgatg
ctggcctggtacggtcatgccgagcccgacatcgtcggcgccttcgaagaggccaacaac
gtcaagttcgtcccgaaatactacaccggcggcgacaacatgctgggcctgatcgcccag
tcgccgcggggcaccttcgatgtgatcctgtctgatgccgaatatgtccagcagctcaat
gccgctggcttcatcgaagagctcgatccggccgattacgccttcgacgatttcttcccc
gagtttcagaaattccccggccactggcaggacgacaagctgttctccgtgatcacgcgc
ttcgggtttctcggcgtcgcctacaacaccgatgccttcacggcggaagaagcctccagc
tacgatctctttgccgacgagcgtctgaccggcaaactgggccatttcgactggcacctg
cccaatctcggccagatgagcctgcatgtgggcaatgccagcccctacgacatcgacgaa
gcggcctgggagcgcgtgcaggagcataccatgggtctgcgccgccaggcgggcgggttc
ttcgactatggcggcaccttctcgtcgctcgacaacggccagatgctggccttcgccggg
atcggcgactggatcaccggcacactggagaaaaacggcagccccgtgcgctccgtcatc
ccggaacagggcggcctgcaatggaccgagagcttctcgatcgggaagggctcgcgcaac
caggagatggccaagaagtggatccagtacatcacctcgcccgagggccaggcaaaatcc
gccgacatggccgcataccccgccatcgtgccgtcgcaggctggctggaaagtgctcaac
gacaccaacccggccgaggcgcggcgccagaacatggtcctgggtgagcgcaacgcgatg
gacatgatccgcgagggcctgatccagtatcgccagctcccggttcagcagagcctggag
gactggaacgacttctggtccgactacaaaggcgcctga
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