Dinoroseobacter shibae: Dshi_2129
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Entry
Dshi_2129 CDS
T00612
Name
(GenBank) putative DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsh03400
]
Dshi_2129
DNA repair and recombination proteins [BR:
dsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Dshi_2129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
AAA_16
AAA_22
Lon_C
AAA
DnaB_C
AAA_24
nSTAND3
NTPase_1
SLFN-g3_helicase
AAA_5
AAA_30
MCM
MeaB
RecA
AAA_14
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
ABV93865
RoseoBase:
Dshi_2129
UniProt:
A8LQJ8
LinkDB
All DBs
Position
2259500..2260867
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AA seq
455 aa
AA seq
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MAKPATRFICAECGAAHSKWSGRCDGCGAWNSISEEVPLSAGPSKKSLGGIRGKKVPLGD
LASEDAPPPRRTSQLEELDRVLGGGLVDASAVLVGGDPGIGKSTLLLQAAASFARAGAKA
VYISGEEATSQVRMRARRLGLADAAVKLGAETNLRDILTTLEAEAPDLAILDSIQTLWSD
TVDSAPGSVAQVRACAHELVTFAKRSGTSVILVGHVTKEGQIAGPRVVEHMVDTVLYFEG
ERGHQFRILRSVKNRFGPADEIGVFEMTGAGLAEVANPSALFLSGRDAPAPGSVVFAGIE
GTRPVLCELQALVAPSALANARRTVVGWDSGRLSMILAVLEARCGIPFTGLDVYLNVAGG
LRIGEPAADLAVATALLSAREDIALPAEMVVFGEISLSGALRPVGQTENRLKEAAKLGFT
KALAPAGSKTGTTSGLETRQMPDLATVVGDMFGAG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacccgccacccgtttcatctgcgccgagtgcggcgccgcccattccaagtgg
tccggccggtgcgacggctgcggggcgtggaattcgatctccgaagaggtgcccctgagc
gcgggaccgtcgaagaagagcctcggcgggatccggggcaagaaagtgcccctgggcgat
ctggcaagcgaggacgcgccgccgccgcgccggacctcgcagctggaggagttggaccgg
gtgctgggcggcgggctggtggatgcctccgccgtgctggtgggtggcgatccggggatc
gggaaatcgacgctcttgctacaggcggcggcgagctttgcccgggcgggggccaaggcc
gtctatatctcgggcgaagaggcgacgagccaggtacggatgcgcgcgcggcggctggga
ctggccgatgcggcggtcaagctgggggccgagaccaacttgcgcgacattctcaccacg
ctggaggccgaggcgccggatctcgccattctcgattcgatccagacgctctggtccgac
accgtggacagcgcgccgggctcggtggcgcaggtgcgtgcctgcgcccatgagctggtc
acctttgccaagcggtcgggcaccagcgtgatcctggtgggccatgtgaccaaggaggga
cagatcgcggggccacgggtggtcgagcacatggtcgacacggtgctttatttcgagggc
gagcgcgggcatcagttccgcattctgcgctcggtcaagaaccggttcggcccggccgac
gagatcggcgtgttcgaaatgaccggcgcggggctggccgaggtcgccaacccctcggcg
ctgttcctgtcggggcgcgacgcgcctgcccccggctcggtggtgttcgcgggcatcgag
ggcacccggccggtactgtgcgaattgcaggcgctggtcgcgccttcggcgctcgccaat
gcgcggcgcacggtggtcggctgggacagcgggcggctgtcgatgatcctggcggtgctg
gaggcgcgctgcggcatcccgttcaccgggctcgatgtttatctcaatgttgcgggcggc
ttgcgcatcggcgagccggcggcggacctcgccgtggccaccgcgctgctctcggcgcgg
gaggatatcgccctgccggcggagatggtcgtcttcggcgagatcagcctttcgggcgcc
ctgcgccccgttggccagaccgaaaacaggttgaaagaggccgcgaaacttggtttcacc
aaggcgcttgccccggcaggcagcaagacggggaccacctcggggctggaaacacggcag
atgccggacctggccacggtggtcggggacatgttcggggcaggataa
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