Dinoroseobacter shibae: Dshi_2159
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Entry
Dshi_2159 CDS
T00612
Symbol
pdhB2
Name
(GenBank) pyruvate dehydrogenase E1 component subunit beta
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00010
Glycolysis / Gluconeogenesis
dsh00020
Citrate cycle (TCA cycle)
dsh00620
Pyruvate metabolism
dsh00785
Lipoic acid metabolism
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01120
Microbial metabolism in diverse environments
dsh01200
Carbon metabolism
dsh01210
2-Oxocarboxylic acid metabolism
Module
dsh_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Dshi_2159 (pdhB2)
00020 Citrate cycle (TCA cycle)
Dshi_2159 (pdhB2)
00620 Pyruvate metabolism
Dshi_2159 (pdhB2)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Dshi_2159 (pdhB2)
Enzymes [BR:
dsh01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
Dshi_2159 (pdhB2)
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Gene cluster
GFIT
Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
Biotin_lipoyl_2
PFOR_II
Transketolase_C_1
Motif
Other DBs
NCBI-ProteinID:
ABV93895
RoseoBase:
Dshi_2159
UniProt:
A8LQM8
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All DBs
Position
2287863..2289218
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AA seq
451 aa
AA seq
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MATEILMPALSPTMEEGTLAKWFVKEGDSVSSGDILAEIETDKATMEFEAVDEGIIGKIL
VESGTDGVAVNTAIAVLIQDGETLSDTVAAAPSDEATDQQPAPAAPVTPARIVIPDEPDL
PPGTQMKSMTVREALRDAMAEEMRRNENVFLMGEEVAEYQGAYKISQGLLDEFGSKRVID
TPITEHGFAGLAVGAAFGGLNPIVEFMTFNFAMQAIDQIINSAAKTLYMSGGQMGCPIVF
RGPNGAAARVAAQHSQDSAAWYAHIPGLKVAMPYSASDAKGLLKSAIRDPNPVIFLENEI
LYGRSFEVPMIDDYTVPFGKARIWREGRDVTIVSFGIGMTYALEAADRLAKDGISAEVVD
LRTLRPLDTETVIASVQKTNRCVTVEEGFPVASIGNHISAVLMQEAFDYLDAPVINLTGK
DVPMPYAANLEKLALVTTDEVIEAVHKVTYR
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggccacagaaattctcatgcccgccttgtctccgaccatggaggaaggcacgctggcg
aaatggttcgtgaaggaaggcgacagcgtttcctcaggggacatcctcgccgagattgaa
accgacaaggcgaccatggagttcgaagcggtcgatgaagggatcatcggcaagatcctg
gtcgaaagcggcacggatggtgtcgccgtgaacaccgcgattgccgtgctgatccaggat
ggcgaaaccctcagcgacacggtcgccgcagcgccttcggatgaggcgaccgatcaacag
cccgcgcctgccgcgccggtgaccccggcaagaatcgtcatcccggacgagccggatttg
cccccgggcacgcagatgaaatccatgaccgtgcgcgaagctctgcgcgacgccatggcc
gaggaaatgcgccggaacgagaacgtattcctgatgggcgaagaggtggccgaatatcag
ggcgcctacaaaatcagccaaggtttgctggacgaattcggctccaagcgggtgatcgac
acgccgattaccgaacacggcttcgcgggacttgcggtgggagctgcatttggagggctc
aacccgatcgtggagttcatgaccttcaacttcgcgatgcaggcgatcgaccagatcata
aactccgcggccaagaccctttacatgtccggcggccagatgggctgccccatcgtgttc
cgcggccccaatggcgcggccgcgcgcgtcgccgcacaacacagccaggactccgccgca
tggtatgcgcatattccggggctgaaggtggcgatgccctactccgcctccgacgcgaaa
ggcctgctgaaatccgccatacgcgatccgaacccggtgatcttcctggagaacgaaatc
ctctacggccgcagtttcgaagtgcccatgatcgacgactacacagtgccctttggcaag
gcgcggatctggcgcgaagggcgcgatgtcaccatcgtcagcttcgggatcggcatgacc
tacgcgctcgaagccgcggatcggttggccaaggatggcatcagcgcggaagtggtcgat
ctgcggaccctccggccgctcgataccgaaaccgtgatcgcatcggtgcagaaaaccaac
cgttgcgtgactgtcgaggaaggcttcccggtggcctccatcggaaaccacatctcggcc
gttttgatgcaggaagcgttcgactatctcgatgcgcccgtgatcaacctgaccggcaag
gatgtcccgatgccctatgccgcaaacctcgaaaaactggcccttgtgacgaccgatgaa
gtgattgaggccgttcacaaggttacgtaccgctga
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