Dinoroseobacter shibae: Dshi_2189
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Entry
Dshi_2189 CDS
T00612
Symbol
cpdB
Name
(GenBank) 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00230
Purine metabolism
dsh00240
Pyrimidine metabolism
dsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Dshi_2189 (cpdB)
00240 Pyrimidine metabolism
Dshi_2189 (cpdB)
Enzymes [BR:
dsh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
Dshi_2189 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
Dshi_2189 (cpdB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
Motif
Other DBs
NCBI-ProteinID:
ABV93925
RoseoBase:
Dshi_2189
UniProt:
A8LQQ8
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All DBs
Position
2314997..2316958
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AA seq
653 aa
AA seq
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MLNPMTRREFLGTAAGASLIALHPYSARAAANQAHLRIMETTDLHVHVFPYDYYADRPRD
TVGLARTAALIDDIRAEATNALLVDNGDFLQGNPMGDYIAYERGMKEGDTHPVITAMNTV
GFDASTLGNHEFNYGLDFLMKSLAGAEFPVISANVVKDMGAGPRGDTTFIAPYVILDRML
TDGAGETHPIKIGLIGFVPPQIMNWDRKHLEGNVQARDILETARAYIPQMREQGADIIIA
LSHSGIGSAQETDGMENASVPLAGLDGIDAIATGHSHLVFPSATYADYAAVDAEAGTIHG
KPATMGGFWGSHMGLIDLMLEREGGAWRVVTAETEARPISQRNEDRSITALVESQDYVLA
SVQEDHDATLAYVRRAVGKTDAPLHSYFALVADDPSVQIVSIAQSWYIADMLKGTEYEGL
PILSAAAPFKAGGRGGPEYYTDVPAGDVAIKNVADLYLYPNTARAVLVTGAQVKDWLERS
AGMFNQVTPGAQDAALLNPDFPSYNFDVIDGVTYQIDLSQPSKFDAKGELLNPDANRIVD
LRHDGAPIDPDARFIIATNNYRASGGGSFPGTGDTVIFEGPDTNRDVIVRYIVEQGTISP
RADGNWRFAPLPGTTVLFETGPKAIDYLGEVTSLTIAPAGAAPDGFMQFRITL
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaccccatgacccgccgggagtttctcggcaccgccgccggagccagcttgatc
gcgctacatccctattccgcccgtgccgccgccaaccaggcacacctgcggatcatggaa
acgaccgatctgcatgtgcatgtcttcccctatgattactacgccgaccgaccccgcgac
accgtgggcctggcccgtaccgctgccctgatcgacgacatccgcgccgaggcgacaaat
gcgctcctggtggacaatggcgacttcctccaaggcaacccgatgggcgactacatcgcc
tatgagcgtggcatgaaagagggtgacacccacccggtgatcaccgccatgaacaccgtg
ggcttcgacgcctcgaccctgggcaaccacgagttcaactacgggctcgatttcctgatg
aaatccctggccggggccgagttccccgtgatctcggccaatgtggtcaaggacatgggc
gcgggcccgcgcggcgacaccacgttcatcgcgccctacgtgatcctcgaccggatgctg
accgacggcgcgggcgagacccacccgatcaagatcgggctgatcggcttcgtgccgccc
cagatcatgaactgggaccgcaagcatctcgaaggcaacgtgcaggcccgcgacatcctc
gagaccgcccgcgcctacatcccccagatgcgcgagcagggcgccgacatcattatcgcg
ctcagccattcgggcatcggctcggcacaggaaaccgacgggatggagaacgcttccgtc
ccgctggccgggctcgatgggatcgatgccatcgccaccgggcacagccacctggtcttc
ccctccgccacctatgcggactatgccgccgtcgatgccgaggccggcacgatccacggc
aagcccgcgaccatgggcgggttctggggctcccatatgggcctgatcgacctgatgctc
gaacgcgagggcggcgcctggcgcgtcgtcaccgccgagaccgaggcgcgcccgatctcc
cagcgcaacgaggaccgctcgatcaccgccctggtcgagagccaggattacgtgctggcc
tcggtgcaggaagaccacgacgccaccctcgcctatgtccgccgcgccgtgggcaagacc
gacgcgccgctgcactcctatttcgcgctggtggccgatgacccctcggtccagatcgtc
tccatcgcgcaaagctggtacatcgccgacatgctgaaaggcaccgagtacgaaggcctc
ccgatcctgtcggcggccgccccgttcaaggccgggggccgcggcgggccggagtattac
accgacgtgcccgcgggcgacgtggcgatcaagaacgtcgcggatctctatctctacccc
aacaccgcccgggccgtgctggtcaccggggcgcaggtcaaggactggctcgaacgctcc
gcgggcatgttcaaccaggtcactccgggcgcacaggacgccgccctcctgaacccggac
ttcccgagctacaatttcgacgtgatcgacggggtcacctaccagatcgacctcagccag
ccctcgaaattcgacgccaagggcgagttgctgaacccggacgccaaccggatcgtggac
ctgcgccacgacggcgcgccgatcgaccccgacgcccgcttcatcatcgccaccaacaac
taccgcgcctcgggcggcggcagcttccccggcaccggtgacacggtaatcttcgaaggg
cccgacaccaaccgcgacgtgatcgtccgctacatcgtcgaacagggcacgatcagcccg
cgcgccgatggcaactggcgcttcgcccccctgcccggcaccaccgtgttgttcgaaacc
gggccgaaggccatcgactacctgggcgaggtcaccagcctgaccatcgcaccggcgggc
gcggcccccgacgggttcatgcagttccgcatcaccctctga
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