Dinoroseobacter shibae: Dshi_2192
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Entry
Dshi_2192 CDS
T00612
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Dshi_2192 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dsh03400
]
Dshi_2192 (uvrB)
DNA repair and recombination proteins [BR:
dsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Dshi_2192 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Dshi_2192 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
AAA_16
eIF3_p135
TrwB_AAD_bind
Kinesin
AAA
Motif
Other DBs
NCBI-ProteinID:
ABV93928
RoseoBase:
Dshi_2192
UniProt:
A8LQR1
LinkDB
All DBs
Position
2319332..2321509
Genome browser
AA seq
725 aa
AA seq
DB search
MNQPVLHASADDVRTRPKLEGGRMFRMATSFEPAGDQPTAIAELSEGVRNGERDQVLLGA
TGTGKTFTMAKVIEQTQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQPEA
YVPRSDTYIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYEAMTQD
LVAGQSYDQRQIMADLVAQQYRRNDAGFQRGSFRVRGDSLEIWPAHMEDRALKFSFFGEE
LESITEFDPLTGEKADTLDRIRIYANSHYVTPRPTLQQAIVSIKKELRIRLDQLVAEGKL
LEAQRLEQRTNFDIEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEYIPDNAIVFADES
HVSVPQIGGMYKGDFRRKMTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAAWE
LEQAGGVFTEQVIRPTGLLDPQVEIRPVEMQVDDLLDEVRRVTADGFRTLVTTLTKRMAE
DLTEYMHEQGIKVRYMHSDIDTLERIEILRDLRLGAFDVLIGINLLREGLDIPECGLVAI
LDADKEGFLRSETSLVQTIGRAARNAEGRVIMYADRITGSMERALAETNRRRAKQIAYNE
EHGITPETVKKNVEDVMAGLYQGDVDMNRVTAKVEKPLHGGNLETVLEGLRADMRKAAEN
LEFEEAARLRDEVKRLEAVDLAIADDPLARQSAIEAASDAAVKAQGRSTAGRPGQRGGNV
KRRKK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaacccgtcctgcatgccagcgccgatgatgtccgcacccgtcccaagctcgaa
ggcggtcggatgttccggatggcgaccagtttcgagcctgctggggaccagccgaccgcc
atcgcggagctgagcgagggcgtgcgcaacggcgaacgcgaccaggtacttctgggcgcg
accgggacgggcaagaccttcaccatggccaaggtgatcgagcagacccagcgccccgcg
atcatcctcgccccgaacaagaccctcgccgcgcagctctatggcgagttcaaggggttc
tttcccgacaacgcggtcgaatatttcgtcagctattacgactactaccagcccgaggcc
tatgtgccgcgcagcgacacctatatcgagaaggaatcccagatcaacgagcagattgac
cggatgcgccactcggcgacccgggccttgctcgaacgcgacgacgtgatcatcgtcgcc
tcggtgtcgtgcatctacggcatcggctcggtggagacctacgaggcgatgacccaggac
ctggtcgcggggcagtcctatgaccagcgccagatcatggcggatctcgtggcccagcaa
taccgccgcaacgacgccgggttccagcgcggctctttccgggtgcgcggcgacagcctg
gagatctggcccgcccacatggaggaccgggcgctgaaattctcgttcttcggcgaagag
cttgaaagcattaccgagttcgacccgctcaccggcgagaaggccgacaccctcgaccgc
atccggatctatgccaactcccactacgtcacgccccgccccacgctccagcaggcgatc
gtgtcgatcaagaaagagctgcgcatccgcctcgaccagctggtcgccgagggcaagctg
ctggaggcccagcggcttgagcagcgcacgaatttcgacatcgagatgctggaggcgacg
ggcgtctgcaacggcatcgagaactattcgcgctacctgaccggccgcgcgccgggggag
ccgccgcccacactcttcgaatacatccccgacaacgccatcgtcttcgccgacgagagc
cacgtctcggttccgcagatcggcggcatgtacaagggcgacttccggcgcaagatgacc
ctggccgagcacggcttccgcctgccgtcttgcatggacaaccggcccctgaaattcgag
gaatgggatgccatgcggccccagtcggtgttcgtctcggccacccccgccgcgtgggag
ctggaacaggccggcggcgtgttcaccgaacaggtgatccgccccacgggcctgctggac
ccccaggtcgaaatccgcccggtggagatgcaggtggacgacctgctggacgaggtccgc
cgcgtcaccgccgacgggttccgcacactggtcaccaccctgaccaagcggatggccgag
gacctgaccgagtacatgcacgaacagggcatcaaggtccgctacatgcactccgacatc
gacacgctggagcgcattgaaatcctgcgggatctccggctcggcgccttcgacgtgctg
atcgggatcaacctgctgcgcgaagggttggacatccctgaatgcggtctggtggcgatc
ctagatgcggacaaggaaggcttcctgcgctcggagacctcgctggtgcagaccatcggc
agggcggcgcggaatgccgaggggcgggtgatcatgtatgccgaccggatcaccggatcg
atggagcgcgcgctggccgaaaccaaccgcaggcgcgccaagcagatcgcctataacgag
gaacatggcatcacgccggagacggtgaagaagaatgtcgaagacgtgatggccgggctc
taccagggcgacgtggacatgaaccgggtcaccgccaaggtcgaaaaaccgttgcacggc
gggaacttggagacggttcttgaagggctgcgggcggatatgcgcaaggccgcggagaac
ctggagttcgaggaggccgcgcgcctgcgcgacgaggtcaagcggctggaggcggtggat
ctggcgattgcggacgacccgctggcgcggcaatcggcgatcgaggcggcgagcgacgcg
gccgtcaaggcccaggggcgcagcaccgcgggccgcccgggccagcgcggcgggaacgtc
aagcggcgcaaaaaatag
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