Dinoroseobacter shibae: Dshi_2251
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Entry
Dshi_2251 CDS
T00612
Symbol
ribB
Name
(GenBank) 3,4-dihydroxy-2-butanone 4-phosphate synthase
KO
K14652
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:
4.1.99.12
3.5.4.25
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00740
Riboflavin metabolism
dsh00790
Folate biosynthesis
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00740 Riboflavin metabolism
Dshi_2251 (ribB)
00790 Folate biosynthesis
Dshi_2251 (ribB)
Enzymes [BR:
dsh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.25 GTP cyclohydrolase II
Dshi_2251 (ribB)
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.12 3,4-dihydroxy-2-butanone-4-phosphate synthase
Dshi_2251 (ribB)
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Gene cluster
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Motif
Pfam:
DHBP_synthase
GTP_cyclohydro2
Motif
Other DBs
NCBI-ProteinID:
ABV93987
RoseoBase:
Dshi_2251
UniProt:
A8LR64
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Position
complement(2371565..2372680)
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AA seq
371 aa
AA seq
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MAERLKTDYSDAISSVEEIIEDARNGRMFILVDHEDRENEGDLVIPAQMATPDAINFMAT
HGRGLICLTLTSERIDQLGLPLMASYNSSRHETAFTVSIEAREGVSTGISAADRARTVAV
AIDAAKGAADIASPGHVFPLRARDGGVLVRAGHTEAAVDVSRLAGLNPSGVICEIMNDDG
SMARLPDLIAFAQRHNLKIGTISDLIAYRRRNDNLVKVTKETKVSSEFGGDWALKIYTDK
TQGAEHIALIKGDISTPEPVLVRMHALDPMLDVVGTGGPGRAGEFGDAMRIVADEGRGVV
VLLRDTTMKIAAGGEEVSPQTLRQYGLGAQILSSLGLSELILLTNSPSPKVIGLEAYGLT
ITGTRKIPMQR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaagactcaagaccgactactcagatgccatctcttccgtggaagagatcatc
gaggatgcccgcaacggccggatgttcatcctcgtcgatcatgaggaccgcgagaacgaa
ggggatctggtgatcccggcgcagatggcgacgccggatgcgatcaacttcatggccacc
catggccgcggcctgatctgtctgaccctgaccagcgagcggatcgatcagttgggcttg
ccgttgatggcgtcctacaactcctctcgccacgagaccgcgtttaccgtgtccatcgag
gcgcgcgagggagtgtccacggggatttcggctgccgaccgggcgcgtaccgttgcggtg
gccatcgacgcggcaaagggcgccgccgatatcgcctcgcccggccatgtcttcccgctt
cgggcgcgggatggcggggtgctggtgcgcgccggacatacggaggcggccgtggatgtc
agtcgccttgccgggctcaacccgtcgggcgtgatctgcgaaatcatgaacgacgacgga
tctatggcgcggttgccggacctgatcgctttcgcgcagcggcacaacctcaagatcggt
acgatctcggacctgattgcctaccggcgccgcaatgacaacctggtgaaggttaccaag
gaaaccaaggtctcctcggaattcggaggcgactgggcactgaagatctacactgacaag
acccagggggccgagcatatcgcgctgatcaagggtgacatctccacgccggagccggtg
ctggtgcggatgcatgccctcgatccgatgctcgatgttgtgggcactggcgggcccggg
cgggccggggagttcggggatgcgatgcggatcgtggcggacgaggggcgcggcgtggtc
gtcttgctgcgtgataccacgatgaaaatcgcggccggtggcgaagaggtgtcgccccag
accctgcgccagtatggcctcggcgcgcagatcttgtcgtcgctgggactgtcggaactg
atccttctgaccaattcaccgtcgcccaaggtgattgggctggaggcttacggcctcacc
atcaccggcacccgaaaaataccgatgcagagatag
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