Dinoroseobacter shibae: Dshi_2254
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Entry
Dshi_2254 CDS
T00612
Name
(GenBank) putative polysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dshi_2254
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_2254
Transporters [BR:
dsh02000
]
Other transporters
Pores ion channels [TC:
1
]
Dshi_2254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB_2
Poly_export
SLBB
bMG3
Wza_C
SnoaL_2
Motif
Other DBs
NCBI-ProteinID:
ABV93990
RoseoBase:
Dshi_2254
UniProt:
A8LR67
LinkDB
All DBs
Position
2375007..2376164
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AA seq
385 aa
AA seq
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MTFGKTAVLSRLARVALILVTTGALAACGLPRSGPVKNELFDASVSEAGNAFIVPVTDVV
AQQTFSRPATGFSSSFLSAGTVSPDAIRPGDILGLTIWENVVEGLLARGGAAASVIEQVQ
VDSAGFIFVPYAGRIMAAGNTPEALRGIITRQLETQTPDPQVSVRRIAGDGATVTVVGNV
NGQGVYTIERPTRTLSSMIARAGGVNAEFAEYDMILVRVIRGGEIGTIWLTDLYRDPSLD
IALRGGDKIIIEQDPRSFIALGATRGQTRVNFDAQDLTALEALAQVGGLDPNLADPTGVF
ILRDESEDVARTVLGRPDLQGPQRVVYVLDLTQPNGFFTAEDFMIKDSDTVYVTEAPIAR
WNKTVSLLFGAVIQPAANIETLTAN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
gtgacattcggcaaaacagctgtgctttcgcgtcttgcgcgcgtggccctgatcctggtc
accaccggcgccttggcagcatgtggcctgccccgcagtggtccggtgaagaacgaactc
ttcgacgcttcggtgtccgaggctggcaacgccttcatcgttccagtgaccgacgtggtg
gcgcaacagaccttctctcgcccggcaacgggcttttccagcagttttctgagcgcaggc
acagtgagcccggacgcgatccggcccggtgacattctcggtctgacgatctgggaaaac
gtggttgaggggctacttgcgcgtggcggcgcggccgcatctgtgatcgaacaggtgcaa
gtcgacagcgccggtttcatcttcgtgccctatgctggccggatcatggccgccggaaac
acgcccgaagccttgcgtggcatcatcacacggcaactggaaacccaaacgcccgacccg
caagtcagcgtccgtcggattgccggggacggcgcgacggtcacggtcgttggcaacgtc
aatgggcagggcgtctacacaatcgaacgaccgacacgaaccctgtcttcgatgattgcc
cgggccgggggtgtgaacgcggaattcgccgaatacgacatgatcctggtccgggtcatc
cgcggaggcgaaatcggcacgatctggctgaccgatctctaccgcgatccgtcgctggat
atcgccctgcgcggcggcgacaagatcatcatcgaacaggacccgcgcagcttcatcgca
ctgggtgcgacccgtggccagacccgcgtgaacttcgatgcccaggacctgacggcccta
gaggcactcgcccaggtcggcggtctggacccgaatctcgcggacccaaccggagtgttc
atcctgcgcgacgagagcgaagacgtcgcccgcacggttctggggcggccggacctgcaa
ggtccgcagcgcgtcgtctacgtgctcgacctgacacaaccgaacgggttcttcactgcg
gaggacttcatgatcaaggacagtgacacggtctacgtcaccgaagcgccaatcgcgcgt
tggaacaagactgtcagcctgctgttcggggccgtgatccagccagcagcgaatatcgaa
accctgacagccaactga
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