Dinoroseobacter shibae: Dshi_2325
Help
Entry
Dshi_2325 CDS
T00612
Name
(GenBank) putative periplasmic binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_2325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_2325
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
Dshi_2325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
ABV94061
RoseoBase:
Dshi_2325
UniProt:
A8LRN0
LinkDB
All DBs
Position
2456174..2457220
Genome browser
AA seq
348 aa
AA seq
DB search
MSTAFRLTATTALAVLATPISAADGDLIVFDYAGFELPEFHSAYVDAHGASPEFTFFGDE
EEAFQKMVSGFRPDVSHVCAGSVTKWVASGLLEPWDTSRIPAFADLNADLTGQDVTEGTG
NTYFIPLDFGSTGIAYNMDEVPAEDVASLDVFRNPKYAQRITLPDNVDDAYALAYLATGT
TDWTTATDAQFEAASAWLREVHSNLRTYWTDPAELAQLLAMGEVLVAWAWNETLPTMTEE
GFPIGYQQEAAEGSSLWLCGYVNLAEGQGSEDKAYDFMNAMLDPSSTRPLLEAGYGHSNA
AAMAQISAEELASVGLGEVNAPVLAQLPMSKELREKQSATFERIKAGF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagccttccgcctgaccgcgacgacagcgctcgccgtcctcgccaccccgatc
tcggccgctgatggcgacctgatcgtcttcgactacgccgggttcgaattgcccgaattc
cacagcgcctatgtcgacgcccacggcgcgagcccggaattcaccttcttcggcgacgag
gaagaggccttccagaaaatggtgtccggctttcgcccggatgtcagccacgtctgcgcg
ggctcggtgacaaaatgggtcgccagcggcctgctggagccttgggatacatcccgcatc
ccggccttcgcggacctgaatgcggatctgaccgggcaggacgtgaccgaaggcaccgga
aacacctacttcatcccgctggatttcggctccaccggcatcgcgtacaacatggacgaa
gtcccggcagaggacgtggcgagcctcgacgtgttccgcaatccgaaatacgcccagcgg
atcaccctgccggacaatgtcgacgatgcctacgcccttgcctacctggcgacgggaacg
accgactggaccaccgccaccgatgcgcaattcgaagcggcatcggcctggctgcgcgag
gtccattcgaacctgcgcacctattggaccgacccggcggagctggcacagcttctggcc
atgggcgaggtgctggtggcctgggcctggaacgaaacgctgccgaccatgaccgaagag
ggattccccatcggctatcagcaggaagctgcggaagggtcctccctttggctgtgcggc
tatgtgaacctcgccgagggccaggggtccgaagacaaggcctatgatttcatgaatgcg
atgttggacccatcctcgaccaggcctttgctggaagcgggctacgggcattccaacgcc
gcggccatggcgcagatcagcgccgaagaactggcctcagtcgggttgggtgaggtcaac
gcgccggtgctggcacaactgcccatgagcaaggagttgcgcgagaagcaatcggccacg
ttcgagcggatcaaggccggtttctga
DBGET
integrated database retrieval system
