Dinoroseobacter shibae: Dshi_2433
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Entry
Dshi_2433 CDS
T00612
Symbol
rbsA1
Name
(GenBank) ribose import ATP-binding protein
KO
K10562
rhamnose transport system ATP-binding protein [EC:7.5.2.-]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_2433 (rbsA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_2433 (rbsA1)
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Rhamnose transporter
Dshi_2433 (rbsA1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_22
SMC_N
AAA_30
RsgA_GTPase
AAA_15
AAA_29
AAA_23
MukB
AAA_16
DUF815
DPOA2_OB
DUF2604
DUF1894
TPR_NPHP3
Motif
Other DBs
NCBI-ProteinID:
ABV94167
RoseoBase:
Dshi_2433
UniProt:
A8LS74
LinkDB
All DBs
Position
complement(2573902..2575434)
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AA seq
510 aa
AA seq
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MLHQTQRPLPSEDPPVSQAALALAHITKTFPGVKALSDVSLSLYPGKVTALIGENGAGKS
TVVKILTGIYQPDGGRILVDGQPVPFSTPQAAADHGVTAIHQETVLFDELSVAENIFLGH
APRGAFGLIDWKKTTENARALLTSIGAELDPDHKLKDLGIANKHLVAIARALSIEARVVI
MDEPTAALSHKEIEELYELVESLKAQGKAILFISHKFDEIFRIADNYTVFRDGQLIGDGA
IADVTEADLVKMMVGRDVSQIFPQRAPNVGDTVLTVQGYAHPTEFDDISFTLREGEILGF
YGLVGAGRSEFMQSLFGITRPSAGSVEIGGARAEISSPADAVDHGIVYVPEDRGKQGAIL
DLPIFQNVTLPSLGRISRKGFLRLAEEFALAREYTERLDLRAASLDTHVGNLSGGNQQKV
VIAKWLATRPRVIILDEPTKGVDIGSKAAVHDFMAELAAQGLAVIMVSSEIPEVLGMSDR
VIVMREGRIVAELAGDDLQPETLVRHAAGI
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaccaaacgcagagacccttgccgtccgaagacccgcctgtgtcccaggcggcg
ctggccctggcgcacatcaccaagaccttcccgggcgtgaaggccttgtccgacgtctcg
ctgtctctgtaccccggcaaggtgaccgcgctgatcggcgagaacggtgccggcaagtcc
accgtcgtcaagatcctcaccggcatctaccagcccgatggcggccgcatcctcgttgac
ggtcagccggtgccgttttccaccccgcaggccgccgccgatcacggggtcacggcgatc
caccaggaaacggtcctgttcgatgagttgtccgtggccgagaatatctttctgggccat
gcgccgcgcggggccttcggtctgatcgactggaaaaagacgaccgagaacgcccgcgcc
ctgctgaccagcatcggcgccgagctcgacccggatcacaagctcaaggacctgggcatt
gccaacaagcacctcgtggcgatcgcccgcgccctgtcgatcgaggcgcgcgtggtcatc
atggacgaacccaccgccgcgctctcccacaaggagatcgaagagctctacgagctggtc
gaaagcctcaaggcccagggcaaggcgatcctgttcatcagccacaagttcgacgagatc
ttccgcatcgcggacaattacaccgtcttccgggatggccagctgatcggggacggcgcg
atcgccgatgtaaccgaggccgacctggtcaagatgatggtgggccgcgatgtcagccag
attttcccgcagcgcgcgcccaatgtgggcgacacggttctgaccgtccaaggctatgcc
catcccaccgaattcgacgatatcagcttcacgttgcgcgagggcgagatcctggggttc
tacggactggtcggggccgggcggtcggaattcatgcaatccctgttcgggatcacccgc
ccctccgccgggtcggtcgagatcggcggggccagggccgaaatcagctcccccgcggac
gcggtcgatcacgggatcgtctatgtccccgaggaccgcggcaagcaaggcgccatcctc
gacctgccgatctttcagaacgtcacgctgccctcgctcgggcggatctcccgcaagggc
ttcctgcggctggccgaggagttcgccctggcccgcgaatacaccgaacggctcgacctg
cgcgcggcctcgctggacacccatgtcggcaacctgtccggcggcaaccagcagaaggtc
gtgatcgccaaatggctggccacccggcccagggtgatcatcctcgacgagcccaccaaa
ggcgtcgatatcggctccaaggccgcggtgcacgacttcatggcggaactggcggcccag
gggctcgccgtgatcatggtcagttcggaaattcccgaagtgctgggcatgtccgaccgc
gtgatcgtcatgcgcgaggggcgcatcgtggccgaactggcgggtgacgacctgcaacct
gaaacccttgtccgccacgccgcggggatctga
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