Dinoroseobacter shibae: Dshi_2451
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Entry
Dshi_2451 CDS
T00612
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00470
D-Amino acid metabolism
dsh00550
Peptidoglycan biosynthesis
dsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Dshi_2451 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Dshi_2451 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
dsh01011
]
Dshi_2451 (murD)
Enzymes [BR:
dsh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
Dshi_2451 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
dsh01011
]
Precursor biosynthesis
Amino acid ligase
Dshi_2451 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
KARI_N
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
ABV94185
RoseoBase:
Dshi_2451
UniProt:
A8LS92
LinkDB
All DBs
Position
complement(2594434..2595828)
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AA seq
464 aa
AA seq
DB search
MIPVRGFSGETIAVLGLGRSGLATARALRAGGATPLCWDDNTEARARAEAEGFACAPLKH
ADAFDGVAALITSPGIPHLYPTPNPTIALAMSLGIPVDNDIGLFFRSFATPDWDEFDSLP
RVIAVTGSNGKSTTSALIHHVLTAAGRPTQLAGNIGRGVLDIDPGEDGGIVVLELSSYQT
ELARALTPDIAVFTNLSPDHLDRHGGMGGYFAAKRRLFTIGGPDRAVIGTDEPEGLFLAS
QLSVAPADDRVIRVTSAKPSGPGWVVSARKGFLAEHRKGRQTGSIDLRPIPGLPGAHNHQ
NAACAYAACRSLGLAPRQIEAGFASFKGLPHRSQIVGTANGVTFVNDSKATNVDSAAKAL
QAFDRIRWIAGGLEKEGGLAALTPHLGGVRKAYLIGRSAAEFALGIPDTPHEVCETMARA
VAAAVAEAEPGDTILLAPAAASFDQYDNFERRGEDFIAEVAKYL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatccccgtgcgcggattttccggcgaaaccatcgctgtgctcggactgggccgctcc
ggcctcgccacggcccgcgccctgcgcgccggcggtgccacgccgctgtgctgggacgac
aataccgaggcccgcgcccgggccgaggccgagggcttcgcctgcgcgcccctcaaacac
gccgacgccttcgacggggtcgcggccctgatcacctcgccgggcatcccccatctctac
ccgaccccgaatcccacgatcgcgctggccatgtccctcggcatccccgtggacaacgat
atcggcctgttcttccgctccttcgccacgccggactgggacgagttcgacagcctcccg
cgggtcatcgcggtcaccggctccaacggcaaatccaccacctccgcgctgatccaccac
gtcctgacggcggcgggccggcccacccagctggccggcaatatcggccgcggcgtgctc
gacatcgacccgggcgaggatggcggcatcgtcgtcttggagctgtcgagctaccagacc
gagcttgcccgcgccctgacccccgacatcgcggtcttcaccaatctcagccccgaccac
ctggaccgtcacggtggcatgggtgggtatttcgcggccaagcggcggctcttcaccatc
ggcgggccggaccgtgcggtgatcggcaccgacgagcccgagggcctgttcctcgcctcc
cagctctccgtggcgcccgccgatgaccgggtgatccgggtgacctccgccaaaccctcg
gggcccggctgggtcgttagcgcgcgcaaggggttcctggccgagcaccgcaagggccgc
cagaccgggtccatcgacctgcgcccgatcccgggcctgcccggggcccataaccaccag
aacgccgcctgcgcctatgccgcctgccgcagcctcggccttgccccgcgccagatcgag
gcgggctttgccagtttcaaggggctgccgcaccgcagccagatcgtcggcaccgcgaac
ggcgtcaccttcgtcaacgacagcaaggccaccaacgtggacagcgcggccaaggcgcta
caggctttcgaccgcatccgctggatcgccggcggactggagaaggagggcggtctcgcg
gccctcaccccccatctgggcggggtccgcaaggcctacctgatcgggcgctcggcggcc
gagttcgccctgggcattcccgacactccccacgaggtctgcgagaccatggcccgcgcc
gtggccgcagccgtggccgaagccgaaccgggcgatacgatcctgcttgcccctgccgcg
gccagcttcgatcagtacgacaatttcgagcgacgcggcgaggacttcatcgccgaggtg
gcgaagtacttatga
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