Dinoroseobacter shibae: Dshi_2609
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Entry
Dshi_2609 CDS
T00612
Symbol
rpoH2
Name
(GenBank) RNA polymerase
KO
K03089
RNA polymerase sigma-32 factor
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsh03021
]
Dshi_2609 (rpoH2)
Transcription machinery [BR:
dsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Dshi_2609 (rpoH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
HTH_19
HHH
UCR_14kD
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ABV94342
RoseoBase:
Dshi_2609
UniProt:
A8LI08
LinkDB
All DBs
Position
complement(2772541..2773437)
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AA seq
298 aa
AA seq
DB search
MASYTNLPAPSPEQGLNRYLQEIRKFPMLEPEEEYMLAKRWVDHEDTEAAHKMVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSAQKKLFFNLRKAKNRIGALEEGDLRPENVARIANDLNVTEDEVISMNRRM
SGGDASLNAMIGSDGEGATEWQDWLEDEDADQADDFAEKDELMVRRELLAEAMGVLNDRE
KDILMKRRLEDKPATLEELSEVYGVSRERIRQIEVRAFEKLQKAMRDLAKEKGLMATA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatataccaatcttccggccccctctccggagcagggcctcaaccggtacctt
caggaaatccgcaagtttcccatgctggagcccgaagaggaatacatgctggccaagcgc
tgggtggatcacgaggacaccgaggcggcgcacaagatggtcacctcgcacctgcgtctc
gccgcgaaaatcgccatgggctaccgcggctacggcctgccccaggcggaggtgatctcc
gaggccaatgtgggcctgatgcaggcggtcaagcggttcgatcccgagaaggggtttcgg
ctggcgacctatgccatgtggtggatccgcgcctcgatccaggagtatatcctgcggtcc
tggagcctggtgaagctgggcacgacctcggcccagaagaagctgtttttcaacctgcgc
aaggccaagaaccgcatcggcgcgctggaggagggcgacctgcgcccggaaaacgtcgcc
cggatcgccaatgacctgaacgtcaccgaggacgaggtgatctcgatgaaccggcggatg
tcgggcggggatgcgtcgctcaacgcgatgatcggctcggatggcgagggcgccaccgaa
tggcaggactggctggaggacgaggacgccgaccaggccgacgacttcgccgagaaggac
gagttgatggtgcgccgcgaactcttggccgaggccatgggcgtgctcaacgaccgcgag
aaggacatcctgatgaagcgccggctggaggacaagcccgcgaccctggaagagctgtcg
gaggtctacggcgtcagccgggagcggatccgccagatcgaggtccgcgccttcgagaag
ttgcagaaggcgatgcgcgacctggccaaggagaaggggttgatggcgaccgcctga
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