Dinoroseobacter shibae: Dshi_2639
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Entry
Dshi_2639 CDS
T00612
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00220
Arginine biosynthesis
dsh00240
Pyrimidine metabolism
dsh00250
Alanine, aspartate and glutamate metabolism
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Dshi_2639 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Dshi_2639 (carB)
00220 Arginine biosynthesis
Dshi_2639 (carB)
Enzymes [BR:
dsh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Dshi_2639 (carB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_5
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ABV94372
RoseoBase:
Dshi_2639
UniProt:
A8LI38
LinkDB
All DBs
Position
2794515..2797832
Genome browser
AA seq
1105 aa
AA seq
DB search
MPKRTDIKSIMIIGAGPIIIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPGL
ADATYIEPITPEIVAKIIEKERPDALLPTMGGQTGLNTSLALEEMGVLAKYGVEMIGAKR
EAIEMAEDRKLFREAMDRLGIENPRATIATTMDECMAALDDIGLPAIIRPAFTLGGTGGG
VAYNRDDYEHFCKSGLDASPVNQILIDESLLGWKEFEMEVVRDKADNAIIVCAIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNGSIAVLREIGVETGGSNVQWAVNPADGRMVVIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELDNDITKVTPASFEPTIDYVVTKIPR
FAFEKFPGAEPNLTTAMKSVGEAMSIGRTFHESVQKALASMETGLTGFDEIAIPGISADH
RSDAPDTAAVVKALARQTPDRLRVIAQAMRHGLSDDEIQAATSYDPWFLARIREIVETEA
QVRRDGLPLEAEGLRKLKMMGFTDARLAKLTGRDEGQVRRARTRLGVTAQFKRIDTCAAE
FEAQTPYMYSTYETPVMGEAECESRPTDATKVVILGGGPNRIGQGIEFDYCCCHACFALT
EAGYETIMVNCNPETVSTDYDTSDRLYFEPLTFEHVMEILRAEQENGTLHGVIVQFGGQT
PLKLANALEAEGIPILGTTPDAIDLAEDRERFQALVNDLGLKQPHNAIASTDAEAFAAAG
DIGFPLVIRPSYVLGGRAMEIVRDMGQLERYIAEAVVVSGDSPVLLDSYLAGAVELDVDA
LCDGENVHVAGIMQHIEEAGVHSGDSACSLPPYSLSDDVLARIRVQTEALARALRVKGLM
NVQFAIKDDEIYLIEVNPRASRTVPFVAKATDSAIASIAARLMAGEPLSNFPLRDPLPHD
APEDQHLPIGDPMTLAHPDTPWFSVKEAVLPFARFPGVDTILGPEMRSTGEVMGWDRSFP
RAFLKAQMGAGTVLPTEGTVFLSIKEADKTEMLVETAAMLTELGLDIVATRGTAAFLKDH
GIASKVVNKVYEGRPDVVDMLKDGRIALVMNTTEGAQAVNDSREIRSVALYDRIPYFTTL
AASHAAAQAMIARREGEIGVRALQG
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagagaaccgatatcaagtcgatcatgatcatcggagccgggcccatcatcatc
gggcaggcctgcgagttcgactattccggggcccaggcctgcaaggcgctgcgcgaagag
ggctaccgggtgatcctggtcaactccaaccccgccaccatcatgaccgacccgggcctg
gccgacgccacttatatcgagccgatcacccccgagatcgtcgccaagatcatcgagaag
gagcgcccggacgcgctcttgccgaccatgggcggtcagaccgggctgaacacctcgctc
gcgctcgaagagatgggcgtgctggcgaaatacggggtcgagatgatcggcgccaagcgc
gaagccatcgagatggccgaggaccgcaagcttttccgcgaggcgatggatcgcctcggc
atcgagaacccccgtgccaccatcgccacgaccatggacgaatgcatggctgcgctggac
gatattggcctgccggcgatcatccggcccgccttcaccctcggcgggaccgggggcggc
gtggcctacaaccgggacgattacgagcatttctgcaaatccgggctcgatgcctcgccg
gtcaaccagatcctgatcgacgagagcctgctgggctggaaagagttcgagatggaggtg
gtccgcgacaaggcggacaatgcgatcatcgtctgcgccatcgagaacgtcgatccgatg
ggcgtgcatacgggcgattcgatcaccgtggccccggcgctgaccctgaccgacaaggaa
taccagatcatgcgcaacggctcgatcgccgtgctgcgcgagatcggggtggaaaccggc
ggctccaacgtgcagtgggcggtcaaccccgccgacgggcgcatggtggtgatcgagatg
aacccgcgggtgtcgcggtcctcggcgctggcctccaaggccacgggctttcccatcgcc
aagatcgccgcgaaacttgccgtgggctataccctggacgagctcgacaacgacatcacc
aaggtcacgcccgccagcttcgagccgaccatcgactatgtcgtgaccaagatcccgcgc
ttcgcgttcgaaaaattccccggcgccgagccgaacctgaccacggcgatgaaatccgtg
ggcgaggccatgtccatcggccgcaccttccacgaaagcgtgcagaaggcgctcgcctcg
atggagaccgggctgaccggcttcgacgagatcgccatccccgggatttctgcggaccac
aggtcggacgcccccgacaccgccgccgtggtcaaggcactggccaggcagacgcccgac
cggctgcgcgtgattgcccaggccatgcgccacgggctgagcgatgacgagattcaggcc
gcgacctcatacgatccgtggttcctcgcgcgcatccgcgagatcgtcgagaccgaggca
caggtgcgccgcgacggcctgccgctggaggccgagggcctgcgcaagctcaagatgatg
ggcttcaccgatgcgcggctggccaagctgacgggccgggacgagggccaggtccgccgc
gcccgcacccggctcggtgtgaccgcgcagttcaagcggatcgacacctgcgcggccgag
ttcgaggcccagacgccttatatgtactcgacctacgaaaccccggtgatgggcgaggcc
gaatgcgaatcgcggcccacggacgccaccaaggtggtcatcctcggtggcgggccgaac
cggatcggccaggggatcgagttcgactactgctgctgccatgcgtgtttcgcgctgacc
gaggcgggctacgagaccatcatggtcaactgcaaccccgagaccgtttcgaccgattac
gacacctcggaccggctctatttcgagccgctgaccttcgagcatgtgatggagatcctg
cgcgccgaacaggagaacggcacgctgcacggggtgatcgtccagttcggcggccagacc
cccctgaagctcgccaatgcgctggaggccgaaggcatcccgatcctcgggaccacgccc
gatgccatcgatctggccgaggatcgcgagcggttccaggcgctggtcaacgacctgggc
ctcaaacagcctcacaacgccatcgccagcaccgatgccgaggccttcgccgccgcgggc
gacatcggcttcccgctggtcatccggccgtcctatgttctgggcgggcgcgcgatggag
atcgtgcgcgacatgggtcagttggagcggtatatcgccgaggcggtggtggtctcgggc
gacagcccggtactgctcgacagctatctcgccggcgcggtggagttggacgtggacgcg
ctctgcgatggggagaacgttcatgtggcgggcatcatgcagcatatcgaagaggcgggc
gtccattccggcgacagcgcctgttccctgccgccctattcgctctccgacgacgtgctg
gcgcgcattcgcgtgcagaccgaggcactggcgcgcgccctgcgggtcaagggcctgatg
aacgtgcaattcgcgatcaaggatgacgagatctacctgatcgaggtgaacccgcgcgcc
tcgcgcaccgtgcccttcgtggccaaggccaccgacagcgcaatcgcgtccatcgccgcc
cggctgatggcgggcgagcccctgtcgaatttcccgctgcgcgaccccctgccccatgac
gcacccgaggaccagcacctgccgatcggcgacccgatgacgctggcgcacccggatacg
ccctggttctcggtcaaggaggcggttctgcccttcgcgcgcttcccgggcgtcgacacg
atcctcggcccggaaatgcgctccaccggggaggtgatgggctgggaccggtccttcccc
cgcgccttcctgaaggcacagatgggcgcgggcaccgtactgccgacggaaggcacggtg
ttcctgtcgatcaaggaagccgacaagaccgagatgctggtggaaacggcggcgatgctg
accgaactgggcctcgacatcgtcgcgaccagagggaccgcggccttcctgaaggatcac
ggcatcgcctccaaggtcgtcaacaaggtctacgagggccgcccggacgtggtcgacatg
ctcaaggacgggcgcatcgcgctggtgatgaacaccaccgagggcgcgcaggcggtcaat
gacagccgcgaaatccggtccgtcgcgctctatgaccgcatcccctacttcaccacgctg
gcggccagccatgccgcggcccaggccatgatcgcccgccgcgagggcgagatcggcgtc
cgcgcgttgcagggatga
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