Dinoroseobacter shibae: Dshi_2680
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Entry
Dshi_2680 CDS
T00612
Symbol
gcvP
Name
(GenBank) decarboxylating glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00260
Glycine, serine and threonine metabolism
dsh00630
Glyoxylate and dicarboxylate metabolism
dsh00670
One carbon pool by folate
dsh00785
Lipoic acid metabolism
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01200
Carbon metabolism
Module
dsh_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Dshi_2680 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
Dshi_2680 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Dshi_2680 (gcvP)
00670 One carbon pool by folate
Dshi_2680 (gcvP)
Enzymes [BR:
dsh01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
Dshi_2680 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ABV94413
RoseoBase:
Dshi_2680
UniProt:
A8LIH2
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All DBs
Position
complement(2839208..2842072)
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AA seq
954 aa
AA seq
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MGFSLTDYAPYDFANRRHIGPSPKEMGQMLATLGVPSLEALINEALPEGIRRRDPLAFGP
ALSERDTLHRMRELADKNTVLTSLIGQGYHGTHTPPVILRNILENPAWYTAYTPYQPEIS
QGRLEALLNFQTMMADLTGLPIANASLLDEGTAAAEAMAMAQRASKSKARGFFVAEDCHP
QTIDVIRTRAEPLGIEVIVGAVDALDPEAVFAALFQYPGSYGHVRDYSDVIEALHGARAL
AVVAADPLALTLLKSPGEMGADIAIGSTQRFGVPMGYGGPHAAYMTCTDALKRSMPGRII
GVSVDARGNKAYRLSLQTREQHIRREKANSNVCTAQALLAVMASMYGVFHGPDGLKAIAQ
TVHRKTARMADGLTELGFKVDPQDYFDTITVKVGSMQGVILAAALREGVNLRKVGTDRIG
ITLDELTLGRTIEAVWRAFGAEGMVYDKTRMVYHLPQEMLRESSYMTHPIFHMNRAEAEM
TRYMRRLADRDLALDRAMIPLGSCTMKLNATVEMLPLTWPEFANLHPFAPADQAAGYHEM
IAELSQMLCDVTGYDAMSMQPNSGAQGEYAGLLAIRGYHRARGEGHRNICLIPTSAHGTN
PASAQMVGWKVVVVKSAENGDIDLEDFRAKAEQHSENLAGCMITYPSTHGVFEEIVREVC
DITHAHGGQVYIDGANMNAMVGLSAPGDLGGDVSHLNLHKTFCIPHGGGGPGMGPIGVKA
HLAPHLPSHATATGAGFGDAGAVASAAYGSPSILTISYAYCLLMGGAGLTQATKVAILNA
NYMAKRLSAGFPILYANDKGRVAHECILDTRVLDKIAGVTVEDVAKRLMDCGFHAPTMSW
PVAGTLMVEPTESEPKAELDRFCDAMLAIREEADAIAAGSLDAENNPLKRAPHTVEDLVG
DWDRPYSREQACYPPGAFRVDKYWPPVNRVDNAYGDRNLVCTCPPVEDYAEPAE
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgggtttttcgctgacggactacgcgccctacgatttcgccaatcgccgccatatcggc
ccctcgcccaaggagatgggacagatgctcgccacgctcggcgtgccgtccctggaggcg
ctgatcaacgaagcgctgcccgagggcatccggcggcgtgatccgctggctttcggcccg
gccctgagcgagcgcgacaccctgcaccggatgcgggagctggcggacaagaacacggtc
ctgacctcgctgatcgggcagggctatcacggcacgcacacgccgccggtgatcctgcgc
aacatcctggaaaacccggcctggtacacggcctataccccctaccagcccgagatcagc
cagggtcggctcgaggcgctgctgaacttccagacgatgatggcggacctgaccgggctg
ccaatcgccaatgcctcgctgctggacgagggcaccgcggcggccgaggctatggccatg
gcgcagcgcgcgtcgaagtccaaggcgcgcggcttcttcgtggccgaggattgccacccc
cagaccatcgacgtgatccgcacgagggccgagcccctggggatcgaggtgatcgtgggc
gcggtcgacgcgctcgacccagaggcggtctttgccgcgctcttccagtacccgggcagc
tatggccatgtgcgcgactattccgacgtgatcgaggctttgcacggcgcccgcgcgctg
gccgtcgtggccgcggacccgctggcgctgaccttgctgaaatcccccggcgagatgggg
gccgatatcgccatcggctcgacccagcgtttcggcgtgcccatgggatatggcggcccg
cacgcggcctacatgacctgcaccgacgcgctgaagcggtccatgccgggccgcatcatc
ggggtgtcggtggatgcgcgcggcaacaaggcctaccggctgtcgctccagacgcgcgag
cagcatatccgccgcgagaaggccaattccaacgtctgtaccgcgcaggcgctgctggcg
gtcatggcgtccatgtacggggtgttccacgggcccgacgggctcaaggccatcgctcag
accgtgcaccggaaaaccgcgcgcatggccgacgggctgaccgagctgggcttcaaggtg
gacccgcaggactatttcgacacgatcacggtcaaggtggggtcgatgcagggcgtgatc
ctcgccgccgccctgcgcgagggcgtcaacctgcgcaaggtcggcacggaccggatcggg
atcaccctggacgagctgaccctgggccgcaccatcgaggcggtctggcgcgccttcggg
gccgagggcatggtctatgacaagacccggatggtctatcacctgccccaggagatgctg
cgcgagagcagctacatgacccacccgatcttccacatgaaccgcgccgaggcggagatg
acccgctacatgcggcgtctggcggaccgggacctggcgctggaccgggcgatgatcccg
ctggggtcgtgcaccatgaagctgaacgcgacggtcgagatgctgccgctcacctggccg
gagtttgccaacctgcacccgttcgcgcccgcggaccaggcggcgggctatcacgagatg
atcgccgagctgtcgcagatgctgtgcgatgtgacgggctatgacgcgatgtcgatgcag
cccaattccggcgcgcagggggaatatgcgggccttctggccattcgcggctatcaccgg
gcgcggggcgagggacatcgcaatatctgcctcatcccgacctcggcccatggcaccaac
cccgccagcgcgcagatggtcggctggaaggtcgtcgtggtgaaatccgccgagaacggc
gatatcgacctggaggatttccgcgccaaggccgagcagcattcggaaaacctcgccggc
tgcatgatcacctatccctcgacccacggggtgttcgaggagatcgtgcgcgaggtctgc
gacatcacccatgcccatggcgggcaggtctatatcgacggggccaacatgaacgccatg
gtggggctgtcggccccgggcgatctgggcggcgatgtgagccacctgaacctgcacaag
accttctgcatcccccatggcggcggcggtcccggcatggggccgatcggggtgaaggcg
catctcgccccgcatctgccgagccatgcgacggccacgggcgcggggttcggcgacgcg
ggggcggtggcgtcggcggcctatggcagcccgtcgatcctgacgatctcctacgcctat
tgcctcttgatggggggcgcggggctgacccaggcgaccaaggtggcgatcctgaacgcc
aattacatggccaagcggctgagcgcgggcttcccgatcctctatgccaacgacaagggg
cgggtggcgcatgagtgcattctcgacacgcgggttctggacaagatcgcgggcgtgacc
gtggaggacgtggccaagcggctgatggattgcggctttcacgcgccgaccatgagctgg
cccgtggcggggacgctgatggtggagccgaccgagtccgagcccaaggccgagctcgac
cggttctgtgacgcgatgctcgcgatccgcgaggaggcggatgcgattgccgcgggcagc
ctggatgcggagaacaacccgctcaagcgcgcgccgcacacggtcgaggatctggtgggc
gactgggaccgcccctatagccgcgagcaggcctgctacccgccgggcgcgttccgggtc
gacaagtactggccgccggtgaaccgggtggacaacgcctatggcgaccgcaacctggtg
tgcacctgcccgccggtcgaagactacgccgaaccggcggaatag
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