Dinoroseobacter shibae: Dshi_2908
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Entry
Dshi_2908 CDS
T00612
Symbol
rluE
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsh03009
]
Dshi_2908 (rluE)
Enzymes [BR:
dsh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
Dshi_2908 (rluE)
Ribosome biogenesis [BR:
dsh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Dshi_2908 (rluE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
ABV94641
RoseoBase:
Dshi_2908
UniProt:
A8LJN8
LinkDB
All DBs
Position
complement(3066582..3067118)
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AA seq
178 aa
AA seq
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MLIAFNKPMNVLSQFTSEGKWRGLKDWIDVPGVYAAGRLDRDSEGLLLLTDDGRLQARIT
DPRAKMPKTYYALVEGRPSQDAINRLCEGVSLKDGPTRPAKVAAVPAPDWLWPRDPPVRL
RKTVPDAWLRLTITEGRNRQVRRMCAAVGLPCLRLIRTQIGDWTLDGLAPGQWRRIAP
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgccttcaacaagcccatgaatgtgttgtcgcaattcacgtccgaggggaag
tggcgcgggttgaaggactggatcgatgtgccgggcgtctatgccgccgggcggctcgac
cgggatagcgagggcttgctgttgctgaccgatgacgggcgcctgcaggcgcggatcacc
gacccgcgggcgaagatgcccaagacctactatgcgctggtggaaggccgcccgagccaa
gacgcgatcaaccgtctgtgcgagggggtcagtctcaaggacgggccgacgcggcccgcc
aaggtcgccgccgtgcccgcgccggactggctctggccgcgcgacccgcccgtgcggctg
cgcaagaccgtgcccgatgcctggctgcgcctgaccatcaccgagggccgcaaccggcag
gtgcggcgcatgtgtgccgccgtgggcctgccctgcctgcgcctgatccgcacgcagatc
ggggattggaccctcgacgggctggccccggggcagtggcgccggatcgccccctga
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