Dinoroseobacter shibae: Dshi_2919
Help
Entry
Dshi_2919 CDS
T00612
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Dshi_2919 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsh03019
]
Dshi_2919 (groL)
03110 Chaperones and folding catalysts [BR:
dsh03110
]
Dshi_2919 (groL)
03029 Mitochondrial biogenesis [BR:
dsh03029
]
Dshi_2919 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dsh04147
]
Dshi_2919 (groL)
Enzymes [BR:
dsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Dshi_2919 (groL)
Messenger RNA biogenesis [BR:
dsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Dshi_2919 (groL)
Chaperones and folding catalysts [BR:
dsh03110
]
Heat shock proteins
HSP60 / Chaperonin
Dshi_2919 (groL)
Mitochondrial biogenesis [BR:
dsh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Dshi_2919 (groL)
Exosome [BR:
dsh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Dshi_2919 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Dshi_2919 (groL)
Exosomal proteins of breast cancer cells
Dshi_2919 (groL)
Exosomal proteins of colorectal cancer cells
Dshi_2919 (groL)
Exosomal proteins of bladder cancer cells
Dshi_2919 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABV94652
RoseoBase:
Dshi_2919
UniProt:
A8LJP9
LinkDB
All DBs
Position
complement(3077174..3078817)
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVKFDIDARNRMLKGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGMKSVAAGMNPMDLKRGI
DLATSKVVEAIKSAARPVNDSAEVAQVGTISANGESEIGQQIADAMQKVGNEGVITVEEN
KGLETETDVVEGMQFDRGYLSPYFVTNPDKMTTELEDAIILLHEKKLSSLQPMVPLLESV
IQSGKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLESVTIDMLGSAKRVSITKDETTIVDGAGAKAEIEARVAQIRNQIEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTEVEVKERKDRVDDALNATRAAVQEGIVVGGGVALI
QAAKHLDGLEGANNDQNIGINIVRKALEAPLRQIAENAGVDGSVVAGKIRESSDLAFGFN
AQTEEYGDMFKFGVIDPAKVVRTALQDAASIAGLLITTEAMVADKPAKEGAGAGGGMPDM
GGMGGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtcaaattcgacatcgacgcccgcaaccgcatgctcaagggtgtc
aacatcctcgcagacgcggtgaaggtgaccctgggccccaagggccgcaacgtggttctg
gacaagagcttcggcgcgccgcgcatcaccaaggacggtgtctccgtcgccaaggaaatc
gaactggaagacaagttcgagaacatgggcgcgcagatggtcaaggaagtcgcctcgcgc
accaatgacgaggccggcgacggcaccacaaccgcgaccgtgctggcgcaagccatcgtc
aaggaaggcatgaagtcggttgccgcgggcatgaacccgatggacctcaagcgcgggatc
gacctggcgacctccaaggttgtcgaggcgatcaaatccgccgcccgtcccgtgaacgac
agcgccgaagtggcgcaggtcggcaccatctccgccaacggcgagagcgagatcggccag
cagatcgcggatgcgatgcaaaaggttggcaacgagggtgtcatcaccgtcgaggagaac
aagggcctggagaccgagaccgacgtggtcgagggcatgcagttcgaccgtggctatctg
agcccctatttcgtgaccaaccccgacaagatgaccaccgagttggaagacgcgatcatc
ctgctgcacgagaagaagctctcgtcgctgcagccgatggtgccgctgcttgagtcggtg
atccagtccggcaagccgctgctgatcatcgcggaagacgtggaaggcgaagcgctcgcc
accctcgtggtcaacaagctgcgcggcggtctgaagatcgcggccgtcaaggcaccgggc
ttcggcgatcgtcgcaaggccatgctgcaggacatcgcgatcctgaccggtggccaggtg
atctcggaagacctcggcatgaagctcgagtccgtgaccatcgacatgctgggttccgcc
aagcgcgtgtcgatcaccaaggacgagaccaccatcgtcgacggcgccggtgccaaggcc
gagatcgaagcccgcgtggcccagatccgcaaccagatcgaggagaccacctcggattac
gaccgtgagaagctgcaggagcgtgtggccaagctcgccggtggtgtggctgtcatccgc
gtcggcggcatgaccgaggtcgaagtgaaagagcgcaaggaccgtgtggacgatgcgcta
aacgcgacccgcgcggctgtgcaggaaggcatcgtcgtcggcggcggtgtggccctgatc
caggcggccaagcatctcgacggtctggaaggcgcgaacaacgaccagaacatcggcatc
aacatcgtgcgcaaggcgctggaagctccgctgcgccagatcgccgagaacgcaggtgtc
gacgggtccgtcgtggccggcaagatccgcgaaagcagtgacctggccttcgggttcaac
gcgcagaccgaagaatatggcgacatgttcaagttcggtgtgatcgacccggccaaggtg
gtgcgcaccgcgctgcaggatgcggcctccatcgccggtctgctgatcaccaccgaagca
atggtggccgacaagcccgccaaggaaggtgccggcgccggtggcggcatgcccgacatg
ggcggcatgggcggcatgatgtaa
DBGET
integrated database retrieval system
