Dinoroseobacter shibae: Dshi_2998
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Entry
Dshi_2998 CDS
T00612
Name
(GenBank) putative mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_2998
Transporters [BR:
dsh02000
]
Other transporters
Pores ion channels [TC:
1
]
Dshi_2998
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Ortholog
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
DUF996
DUF6627
Motif
Other DBs
NCBI-ProteinID:
ABV94731
RoseoBase:
Dshi_2998
UniProt:
A8LKE8
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Position
3162333..3164813
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AA seq
826 aa
AA seq
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MHTPSAPMALCAARFVFLRGFLVAVATLLALVLGSWTASAQSTFPIPGMTGNSSTEAPAE
DAPAEATTPADPTQALIELLQDEAARAALIAQLEQAAAGTAAAPEGSATAPAAAAPEATT
TTTSTVGNFSTRLIQDLRTTMADNLRGFMARVERIPTTLGLAIRGLNSDLLLTIVRDLVE
AVLVTYGALILLRLAMRPLLRMIGRKAVSTNWLYRFILRIIGTGLLALAIPIALVIGVAV
VSVSVVAENGASLNTAQAAFFAAFALVEMLKLPSRFVLTPRTDQLRFIDVSDKAARQIQR
LIAFAIGLAAYGQLVAVPVVTEQTSVFIGRAVATLLGAIVIVYLVGVVLAYRKKVGAWLT
RYSKEDVTLDEVLSYFALRWHWPVLAYLVYVLVVVLTRPGNVLGPLAADTVRVVLILGIG
GTVTMLARRATQRRVRLPEMVDSRLPLLASRLNRLLPAGLVVVRIAVVILVVLSILDVVE
LFDFSGYLGSDAGGAMVGAIFGVALGLVFVAVVYLAVSSWVDYQLNPFVGKPPTPRTVTL
LTLLRNAVTIALVIFGGMFALSQLGLNIGPLLASAGVLGLAISFGAQKLVEDIITGIFIQ
FENAMNVGDVVDVGGVVGTVEKLTVRSVTLRDLQGVVHMIPFSSASMISNYMREFSYYVC
DMGVAYREDIEMAKQAMFDAFEELRADPDQGGFLIDDLEWFGLNSFGDSAIVLRARIKTQ
PGKQWGVGRAYNLLLKKIFDDRGIEIPFPHQTIYFGEDRKGKAPPIHVMMQTGDAAASQA
HPVTEAIPDARGPEQLEMDETRRRQVPPDRGDETIPGQEDDDGAGR
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcataccccctctgccccgatggcgctctgcgccgcacgatttgttttcttgcgcggc
ttccttgtcgcggttgcgaccctgctggccctggtgctgggaagctggaccgccagcgcc
cagtcgaccttccccatcccggggatgaccggcaacagcagcaccgaggcccccgccgag
gacgcccctgccgaggccaccaccccggcggacccgacccaggccctgatcgagcttttg
caggacgaggcggcacgcgccgcattgatcgcacagctggaacaggccgccgccggcacc
gcggccgcgcccgagggaagcgccaccgctccggccgccgccgcgcccgaggccacaacc
acaaccacgagcaccgtcggcaatttctcgacccgcctgatccaggacctgcgcaccacc
atggcggacaacctgcgcggcttcatggcgcgggtggaacgcatcccaacgaccctcggc
ctcgcgatccgggggctgaattcggatctgttgctgaccatcgtgcgagatctggtcgag
gccgtgctggtcacctacggcgcgctgatactgctgcggcttgcgatgcgccccttgctg
cgcatgatcgggcgcaaggcagtcagtaccaactggttgtatcgcttcatcctgaggatc
atcggcacgggcttgctggccctggccatccccatcgcgctggtgatcggcgtggcggtc
gtcagcgtttcggtcgttgccgagaacggcgcttccctgaacaccgcgcaggctgccttc
ttcgccgccttcgcgctggtcgagatgctgaagctgccatcgcgcttcgttttgaccccc
cggaccgaccaactgcgcttcatcgatgtgagcgacaaggccgcccggcagatccagcgg
ctgatcgccttcgccatcggtttggcggcctacgggcaactcgtcgccgtgccggtggtg
accgagcagacctcggtcttcatcgggcgggcggtggcgaccctgctgggggcgatcgtg
atcgtctacctcgtaggcgtcgttctggcctatcgcaagaaggtgggcgcctggctgacg
cgctacagcaaggaggacgtcacccttgacgaggtgctgtcctatttcgcgctgcgctgg
cactggccggtgctggcctacctggtctacgtcctcgtggtggtgctgacgcggccgggt
aacgtgctgggtccgctcgcggcggacacggtgcgggtggtgctgatcctcgggatcggc
ggcacggtcaccatgctggcgcgccgcgccacccagcgccgggtgcggctgccggagatg
gtcgatagccgactgcccctgctggcgagccggttgaaccggctgcttcctgcggggctg
gtcgtggtacggatcgcggttgtgatcctggtggtgctgtcgatcctggacgtggtcgag
ttgttcgatttctcgggatatctgggctcggacgcgggcggtgccatggtgggcgcgatc
ttcggcgtggcgctggggctggtgttcgtcgcggtcgtctacctggccgtgtcgtcctgg
gtcgactaccagctcaacccgttcgtcgggaaaccgcccaccccgcggacagtcacgctg
ctgacgctgctgcgcaacgcggtgaccattgcgctggtgatcttcggcgggatgttcgcc
ctgtcgcaattggggctgaacatcgggccgctgctcgcctcggccggggttctggggctg
gcgatttccttcggtgcgcagaagctggtggaggacatcatcaccggcatcttcatccag
ttcgagaatgccatgaacgtgggcgacgtggtggatgtgggcggcgtcgtgggcacggtg
gagaaactgaccgtgcgatcggtcaccctgcgcgatctgcagggcgtggttcacatgatc
ccgttctcctcggcttcgatgatctcgaactacatgcgggaattctcgtactatgtctgc
gacatgggcgttgcgtatcgcgaggatatcgagatggcgaaacaggccatgttcgacgcc
ttcgaggagttgcgcgcggatcccgaccagggcggcttcctgatcgacgatctggagtgg
ttcgggctgaattccttcggcgacagcgcgatcgtgctgcgagcgcggatcaagacccag
ccgggcaagcaatggggcgtgggccgggcctataacctgctgctgaagaagatcttcgac
gatcgcggcatcgagatcccgttcccgcaccagacgatctatttcggcgaggaccgcaag
ggcaaggcgccgccgatccatgtgatgatgcagaccggcgatgccgcggcgtcccaggcg
catccggtgaccgaggcgatcccggacgcgcgcggccccgagcagctggagatggacgag
acgcggcgcaggcaggtgcccccggaccgcggcgacgagaccatccccggccaggaggac
gacgacggggcgggccgctag
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