Dinoroseobacter shibae: Dshi_3016
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Entry
Dshi_3016 CDS
T00612
Symbol
deoC
Name
(GenBank) deoxyribose-phosphate aldolase
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00030
Pentose phosphate pathway
dsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Dshi_3016 (deoC)
Enzymes [BR:
dsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
Dshi_3016 (deoC)
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Gene cluster
GFIT
Motif
Pfam:
DeoC
Motif
Other DBs
NCBI-ProteinID:
ABV94749
RoseoBase:
Dshi_3016
UniProt:
A8LKG6
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Position
3184761..3185780
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AA seq
339 aa
AA seq
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MSSTPTDTTTTGQQIDLHRGHLPDTVLPRNPGLPLDLDWVRSAAVNTSAVERRAASLPGR
RSVKKDHQAAWLLKAVTLIDLTTLAGDDTAGRVRRLCAKARQPVAPEVLAALGMGPVTTG
AVCVYHDMVHVAVEALEGSGIPVAAVSTGFPAGLSPFHLRVAEIEESVAAGAAEIDIVIS
RRHVLTGNWQALYDEMRAFRAACGDAHVKAILATGELGDLGNVARASLVCMMAGADFIKT
STGKESVNATLPVSLVMIRAIRDYEAATGVKVGYKPAGGISKAKDALVYLSLIKEELGDR
WLQPDLFRFGASSLLGDIERQLEHHVTGAYSATHRHALG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcacccccacggacaccacgaccacgggccaacagatcgacctgcaccggggg
cacctgcccgacacggttctgccccgcaatccggggcttccgctggacctcgactgggtg
cggtcggcggcagtgaacacctcggccgtggaacgccgggccgcaagcctgcccgggcgg
agatcggtcaagaaggaccatcaggcggcctggctgctgaaggcggtcacgttgatcgac
ctgaccacgctggcgggcgacgacacggctggccgggtgcggcggctatgtgccaaggcg
cgccagcccgtcgcaccggaggttctggccgcgctcggcatggggccggtcaccaccggg
gcggtctgcgtctatcacgacatggtccacgtggcggtcgaggcgctggagggctccggc
atccccgtcgccgccgtctccaccgggtttcccgccggcctgtcgcccttccacctgcgc
gtggccgagatcgaggaaagcgttgcggcgggggctgccgagatcgacatcgtgatctcg
cgccgccatgtcctgaccggcaattggcaagcgctctatgacgagatgcgggcgtttcgc
gcggcctgcggcgacgcccatgtgaaggcgatcctggccacgggcgagttgggggacctg
ggcaacgtcgcccgcgcgagccttgtctgcatgatggcgggcgcggatttcatcaagacc
tccaccggcaaggagagcgtgaatgccaccctgcccgtgagcctcgtgatgatccgggcg
atccgggactatgaggccgcgacgggggtgaaggtcggctacaagcctgcgggcgggatc
tccaaggccaaggatgcgctggtctacctcagcctgatcaaggaagagctgggcgatcgg
tggctgcagccggatctgttccggttcggggcctcgtctctcttgggcgatatcgagcgg
cagttggagcaccacgtcaccggcgcctattccgcgacgcaccggcacgcgctgggctga
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