Dinoroseobacter shibae: Dshi_3099
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Entry
Dshi_3099 CDS
T00612
Name
(GenBank) protein of unknown function DUF558
KO
K09761
16S rRNA (uracil1498-N3)-methyltransferase [EC:
2.1.1.193
]
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dsh03009
]
Dshi_3099
Enzymes [BR:
dsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.193 16S rRNA (uracil1498-N3)-methyltransferase
Dshi_3099
Ribosome biogenesis [BR:
dsh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Dshi_3099
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltrans_RNA
PUA_4
Motif
Other DBs
NCBI-ProteinID:
ABV94832
RoseoBase:
Dshi_3099
UniProt:
A8LL83
LinkDB
All DBs
Position
complement(3266467..3267216)
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AA seq
249 aa
AA seq
DB search
MVRAMSAGKIRLYVEHPLGQGQTVPLSGAQAHYLFGVMRRGVGEVVTLFNGHAGAWAARV
VEAGKRGGVLEVETQTAPQRDPPDLWLCFAPIKKARTDFIVEKAAEMGARRIVPVQTAFT
NAERIRRDRLQAHAVEAAEQCGGTFVPEVADLVGLDRLLSDWPSDRSLMFCDEALAEEGA
AAAADTPALPDGPWAILIGPEGGFSEPERARLRAMPQAQSVRLGPRILRADTAAVAALTL
WQIRYGDWR
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcgccatgtcggctggaaagatcaggctttatgtagagcaccctctgggtcag
gggcaaacggttccgttgtcgggcgcccaggcccattacctgttcggggtgatgcgccgg
ggtgtgggcgaggtcgtaaccctgttcaatggtcatgccggggcctgggccgcgcgggtg
gtcgaggccgggaaacgcggtggcgtgctggaggtcgagacccagaccgcgccgcagcgc
gatccgccggacctgtggctctgtttcgcgccgatcaagaaggcgcgcacggatttcatc
gtcgagaaggccgccgagatgggcgcgcgccggatcgtgccggtgcagactgccttcacc
aatgccgaacggattcgccgcgaccggctgcaggcccatgcggtcgaagcggccgagcaa
tgcggcggcaccttcgtgcctgaggtggcggatcttgtgggtctggaccggctgttgtcg
gactggccatcggatcggtccctgatgttctgcgacgaagcccttgcggaggagggggcg
gcggcggcggcggatacgcccgcgctgccggacgggccctgggcgatcctcatcggtccg
gaaggcgggttttccgagcccgagcgcgcccgcctgcgcgccatgccgcaggcacaatcc
gtgcgcctcggcccgcggatcctgcgggcggacacggcggcggtcgcggcgctcacactc
tggcaaattcggtacggggactggcgatga
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