Dinoroseobacter shibae: Dshi_3144
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Entry
Dshi_3144 CDS
T00612
Symbol
ugpB3
Name
(GenBank) sugar ABC transporter, periplasmic sugar-binding protein, putative
KO
K02027
multiple sugar transport system substrate-binding protein
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_3144 (ugpB3)
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative multiple sugar transporter
Dshi_3144 (ugpB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SDH5_plant
Motif
Other DBs
NCBI-ProteinID:
ABV94877
RoseoBase:
Dshi_3144
UniProt:
A8LLW8
LinkDB
All DBs
Position
complement(3310655..3312037)
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AA seq
460 aa
AA seq
DB search
MRIQDGYSRANNASQREEEMRKRTFLATVATAALVAMAPVTVSAEELGKYNLLPGKPFEG
TTLNILSVVTPQFDGLMLRDEEFTELTGIETEWTFIPFGSLQEKINAEGIAANGTFDVVN
YLDSWGPPNAHWLKRIDELMARDGISMDRYPAAFARSAQFEGETLGFPLRAHPQLMFYRK
DLIPEPPETWEDVIRIGKELKETNPDIAPLALYYNNDGNRQNLFIWLNFLWAAGADIFNE
DGTAAWATPEGIQATKDYIELHTVHQITNPNSLAFVEQDARQSFMQGNSAMMPVWWWAYS
GFYNPDSSTLTKDQVGFTGMPSYKGVTKTYAISMPFSISEYSENQEAAWEFLKWLSNPEM
DKANAIEREVGGKTIINNVVTHISSLQDPEVNAANDGIQAAAWESLKESDIMPQIPEWSE
VGDILSAAIAEAAAGGDVEELMTAAADRADRVLRRAGRIQ
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattcaagatgggtatagtcgagccaataacgcgtcgcaacgggaggaagagatg
cgcaagagaacctttttggccacggtcgcgaccgcggcccttgtcgccatggccccggtc
acggtctcggctgaagagctcggcaaatacaacctgctgccgggcaagcccttcgaaggc
accaccctcaacatcctcagcgtggtcaccccgcaattcgacgggctgatgctgcgggac
gaggagttcaccgagctgaccggcatcgagaccgagtggaccttcatccccttcggctcc
ctgcaggagaagatcaatgccgaaggcatcgccgccaacggcaccttcgatgtggtcaac
tacctcgacagctggggaccgcccaacgcccactggctcaagcggatcgacgagttgatg
gcccgtgacgggatctccatggaccgctaccccgcggccttcgcccgctcggcgcagttc
gagggcgagactctgggcttcccgctgcgcgcccatccgcagctgatgttctatcgcaag
gacctgatccccgagccgcccgagacctgggaggacgtgatccggatcggcaaggagctg
aaggaaaccaaccccgacatcgcgccgctcgcgctctactacaacaatgacggcaaccgg
cagaacctgttcatctggctcaacttcctgtgggccgccggggcggatatcttcaacgag
gacggcaccgccgcctgggccacgcccgaaggcattcaggccactaaggactatatcgag
ctgcacaccgtccaccagatcaccaaccccaactcgctcgccttcgtcgagcaggacgcg
cggcagtccttcatgcaaggcaactcggcgatgatgccggtgtggtggtgggcctattcc
ggcttctacaaccccgacagctccaccctgaccaaggaccaggtcggcttcacgggcatg
ccctcctataagggcgtgaccaagacctatgcgatctctatgcccttctcgatctcggag
tattccgagaaccaggaagcggcctgggagttcctgaaatggctgtccaaccccgagatg
gacaaggccaacgccatcgaacgcgaggtgggcggcaagaccatcatcaacaacgtggtc
acccatatctcgtccttgcaggacccggaggtgaacgccgccaatgacggcatccaggcc
gccgcatgggagagcctgaaggaatccgacatcatgccccagatcccggaatggtccgag
gtcggtgacatcctgtccgccgcgatcgccgaggccgccgcgggcggcgatgtcgaggaa
ctgatgaccgccgcggccgaccgcgcggaccgggttctgcggcgcgcaggccggatccag
taa
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