Dinoroseobacter shibae: Dshi_3155
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Entry
Dshi_3155 CDS
T00612
Name
(GenBank) TRAP transporter-DctM subunit
KO
K11690
TRAP-type transport system large permease protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Dshi_3155
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_3155
Transporters [BR:
dsh02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Dshi_3155
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DctM
DUF7972
Motif
Other DBs
NCBI-ProteinID:
ABV94888
RoseoBase:
Dshi_3155
UniProt:
A8LLX9
LinkDB
All DBs
Position
3320427..3321716
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AA seq
429 aa
AA seq
DB search
MIWAISAGLLGLLALSIPVGIVLFLLGFGVDAFFSPFPLIRGLGNLVWSTSNNATLIAIP
FFVLLGEILVRSGIATRTYSALDRWVSWLPGGLVHANVATATMFSATSGSSVATAATVAT
VAMPQAEKLGYDPRLFSGAIAAGGTLGIMIPPSINLIVYGFLTQTSIPQLFLAGLVPGIA
LALGFMAITVVICLIRPELGGLRRTFPFPEMLRALLQLIPIILLFTVIIGTIYKGWATPT
EAAAVGVAGAVVIAALFGGVSVKMFADSILGTIKITSMIMLVVIAASFLNFTLASAGLGR
ELQSLLDGLGLTPTGLILVVVLIYIVLGFFIETLSLMVVTIPIIVPLVVAQGFDPIWFGI
LMIVLIEMALITPPVGLNLYVVQGARKSGKMSEVMVGAIPYVIAMLIMVGLLILFPSIAL
YLPSVLSGS
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgatctgggccatttccgcggggcttctggggctgctggcgctgtcgatcccggtgggg
atcgtgctgttcctgctgggcttcggggtggatgcgttcttcagcccctttccgctgatc
cgggggcttggcaacctggtctggtcgacctcgaacaatgccactctgatcgcgatcccg
ttcttcgtgcttctgggcgagatccttgtacgctctggcatcgcgacgcggacctattcc
gcgctggaccgctgggtcagctggctgcccggcgggctggtgcatgccaacgtggccacg
gccaccatgttctcggccacctccggctcgtcggtcgccacggcggccacggtcgccacg
gtcgccatgccacaggcggagaagctggggtatgacccgcggctcttttccggggcgatc
gcggcgggcggcacgctgggcatcatgatcccgccatcgatcaacctgatcgtttacggg
ttcctgacccagacctcgatcccgcagctattccttgccgggctcgtgccgggcatcgcg
ctggcgctggggttcatggcgatcacggtggtgatctgcctgatccgccccgaacttggc
gggctgcgccggacctttcccttccccgagatgctgcgcgcgctcttgcagctgatcccg
atcatcctgcttttcacggtcatcatcggcacgatctacaaagggtgggccaccccgacc
gaggccgccgccgtgggcgtggccggcgcggtggtgatcgcggcgctcttcggcggggtg
agcgtaaagatgttcgcggacagtatcctcggcaccatcaagatcacgtccatgatcatg
ctggtggtcatcgccgcctcgttcctgaacttcacgctggcctcggcggggctgggacgg
gagctgcaatccctgctggacggtctgggcctcacgcccaccggactgatcctggtggtg
gtgctgatctatatcgtgctgggtttcttcatcgagacgctgtcgctcatggtggtgacg
atcccgatcatcgtgccgctggtggtcgcacaggggttcgatccgatctggttcggcatc
ctgatgatcgtgctgatcgagatggccctgattacgccgccggttggtctgaacctctat
gtggtgcagggggcgcgcaaatccgggaagatgagcgaagtgatggtgggcgcgatccct
tacgtgatcgccatgctgatcatggtcggcctgttgatcctgtttccgtccatcgccctt
tatcttccatctgtgctgagcgggagctga
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