Dinoroseobacter shibae: Dshi_3174
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Entry
Dshi_3174 CDS
T00612
Symbol
nirH
Name
(GenBank) putative nitrite reductase heme biosynthesis H protein
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00860
Porphyrin metabolism
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Dshi_3174 (nirH)
Enzymes [BR:
dsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
Dshi_3174 (nirH)
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Paralog
GFIT
Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_AsnC-type
wHTH-HSP90_Na-assoc
TrmB
HTH_24
Phage_DsbA
CTV_P23
WHD_RecQ_mid_bact
Motif
Other DBs
NCBI-ProteinID:
ABV94907
RoseoBase:
Dshi_3174
UniProt:
A8LLZ8
LinkDB
All DBs
Position
complement(3337486..3337971)
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AA seq
161 aa
AA seq
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MKMDHIDRALIAETQAGLPLVAEPYAAVAEALGMPEDQVMARLRSLKARGIMRRIAIAPN
HYKLGMTANGMTVWDVRDADVAELGARIGALGFVSHCYERPRALPDWPYNLFAMVHGDTR
DEVEAKRAEIATLLGAACRASDVLYSKRILKKTGLRLAKGK
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggatcatatcgaccgagcgctcatcgccgaaacccaggccgggttgcccctg
gtggccgagccctatgccgccgtggccgaggcgctcgggatgcccgaggaccaggtcatg
gcgcgcctgcgcagcctaaaggctcgcgggatcatgcgccggatcgccatcgcgcccaac
cactacaagctgggcatgaccgcaaatggcatgaccgtctgggacgtgcgcgatgcggat
gtggccgagctgggtgcccggatcggcgcgctcggctttgtctcccattgctacgagcgg
ccccgcgcgctgccggactggccctacaacctcttcgcgatggtccatggcgacaccaga
gacgaggtcgaggccaagcgcgccgagatcgccaccctgctgggagcggcctgccgggcg
tcggacgtcctctattccaagcgcatcctgaaaaagaccggcctgcggctggcaaagggg
aaatga
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