KEGG   Dinoroseobacter shibae: Dshi_3214
Entry
Dshi_3214         CDS       T00612                                 
Symbol
cas3
Name
(GenBank) cas3: CRISPR-associated helicase Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
dsh  Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:dsh02048]
    Dshi_3214 (cas3)
Enzymes [BR:dsh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Dshi_3214 (cas3)
Prokaryotic defense system [BR:dsh02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Dshi_3214 (cas3)
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 DEAD ResIII AAA_19 AAA_22 HD Helicase_C UvrD-helicase
Other DBs
NCBI-ProteinID: ABV94947
RoseoBase: Dshi_3214
UniProt: A8LM38
LinkDB
Position
complement(3381532..3384105)
AA seq 857 aa
MRRVKYNVDARITHNPAWGKTDAAGRPSHHLAHHSMDVAAVLEGLLRHPVISARAAAAAG
IYLKPEAVAWLSAFAFLHDIGKLSPRFQAKVWPDGIAGGTASHLSEGLIWADRLLDGQPL
LDGAAGPLVAPLVAGGMEKAWFGALLAHHGRPMAFDSFVYPPNPRDVFRDVPGYDWRAED
RRMGAALRQWFPEIAIDLAVLRSHRLVHLFAGLLALADWIGSDDGAFPQRRDFDPDYGAS
ARARAAAALVAIGLSNPAWPGTAPSFRDLTGHPVPRGVQQTIADIPLEARLVIIEAETGS
GKTEAALAHFARLRSEGRVDALYFAVPTRAAAGQLHRRIQEAMARIGGPEAVLAVPGMLR
AGLAEGRKLPGFRVLWDDDRVHWAAEHPTRFLAAPVAVGTIDQALLAGLQVKHAPLRAAA
LSRSLLVIDEVHASDAYMNAVARPLVAGHTALGGHTLLMSATLGAGQRAAWLGQPAPSQR
AASGLPYPAIWHDAAPADPLRPDPVGYAKSVHPRLVGTMDAEAAAHKAVAAAEKGARVLV
LRNTVEAAVATWRAATRARADLCLSVLGQPALHHARFAAEDRRKLDAAVEQALGRAGVTT
GIVVLGTQTLEQSLDIDADFLITDLCPMDVLLQRIGRLHRHADRTRPAGFEAAVASIMVP
ECGLAALADGPRFENGLGAWQTAGGYAGIYLDLRGLELTRRCIADRPVWQIPEDNRTLVE
AATHPDALASVEAALDWDEYGHRIDAKSLAEGRAGGLLSLDRGAPFPTAFPGADEAVQTR
LGARGPSFALPTGTVGPFGTPISVIAPPAHWCVGLTGEEPVNVTQGETGIRLTIGDNEFL
YDRSGLSRARAPRRPLG
NT seq 2574 nt   +upstreamnt  +downstreamnt
ttgcgaagggtcaagtacaacgtggacgcgcgcattacacacaacccggcctggggaaag
accgacgcggccggacgcccctcgcatcacctggcccaccattcgatggatgtggccgcg
gtgctggaggggttgcttcgccatccggtgatctcggcgcgcgcagccgcggcggcgggc
atttaccttaagccggaggctgtcgcctggttaagcgcctttgcctttctccacgacatc
ggcaagctgtccccgcgctttcaggccaaggtctggcccgatggcatcgcgggcggaacg
gccagtcacctcagcgaggggctgatctgggcggatcggctgctagacggtcagccgctt
ctggacggggcggccggtccgctcgttgcgccgctggtcgccggcggtatggaaaaggcg
tggtttggcgcgttgctggcccatcacggtcgcccgatggcgttcgacagctttgtttat
ccgcccaacccgcgggacgtctttcgagacgtgccgggctacgactggcgggccgaggat
cgccggatgggtgcggctctgcgccagtggttccctgagatcgccatcgatctggcggtc
ctgagatcccaccgcctggtgcacctcttcgcgggtctgctggcgctcgcggactggatc
ggctccgacgacggggcgtttccccagcgccgcgactttgaccctgactatggcgcatcc
gcccgcgcgcgcgccgcggcggcgcttgtggccatcggcctgtcgaaccctgcttggccg
gggaccgcgcccagtttccgggatttgacaggccacccggtgccgcgcggcgtgcaacaa
acgatcgcagatattcccctcgaggcccgcctggtgatcatcgaggcagaaaccggctcg
ggcaagaccgaggcggcgctggcccatttcgcgcggttgcggtccgaggggcgggtcgat
gcactttatttcgcggttccgacaagggctgctgcgggacagttgcaccgccgcatacag
gaggcgatggcgcgcatcggcggcccggaggcggtgctcgctgtgccaggaatgcttcgc
gccgggctggcggagggacgcaagctgcccggctttcgcgtgctgtgggacgatgatcgc
gtccattgggcggcggagcaccccacgcggtttctcgctgcccctgtggcggtcggaacg
atcgaccaagcacttctggcgggcttgcaggtgaagcacgcacccttgcgggccgccgcg
ctgtcgcggagccttctggtgatcgacgaggtccatgcttcggacgcctacatgaacgcg
gtcgccagacctctggtggctgggcataccgcgctggggggccatacgctcttgatgtcg
gcgacgctcggcgcggggcaacgggcagcctggctcgggcagcccgccccgtcgcaaagg
gctgcgagcgggcttccataccccgcgatctggcacgatgcagctcctgcggaccccctg
cggcccgatccagttggctacgccaagtcggtacatccccgtcttgtcggcacgatggac
gcggaggccgccgcgcacaaagccgttgcggcggctgagaagggcgcccgggttctggta
ctgcgcaacacggtggaggcggctgtggcgacttggcgggcggcgacgcgtgcgcgcgcc
gatttgtgcctctcagttttgggccagccagccctgcatcacgcccggttcgcggcggag
gatcggcgaaagctggatgcagcggtcgagcaggctcttgggcgtgcgggagtgacaacg
ggaatagtggtcttgggtacgcaaaccctggaacaatctctcgacatcgatgcggatttc
ctgatcacggacctctgccccatggatgtcttgttgcaacgtattggtcgcctgcaccgc
cacgcggatcgcacccggcccgcaggtttcgaagcagccgtcgcgtccattatggtcccc
gagtgcgggctggccgccttggccgatggtccgcgtttcgagaacgggctgggcgcgtgg
cagaccgccggtggttacgcagggatctatcttgacctgcgcggcctcgaactcacccga
cgctgcattgccgaccggcctgtttggcagatccccgaggacaaccggacccttgtggag
gctgcgacgcatcccgatgccttggcttctgtcgaagccgcgctggactgggacgagtat
ggccatcgcatcgatgcaaagtccctcgcagaagggcgcgcgggcgggcttttgtccctt
gatcggggcgcgccgttccccacggctttcccgggcgctgacgaagcggtgcagacccgg
ctgggcgcgcgcggcccgagtttcgcattgcccactggcaccgtcggccccttcggcacg
ccaatctctgtgatcgctcccccggcccactggtgcgtcggcctgaccggagaagagccc
gtgaacgtgacacaaggagagactgggattcgtctgaccattggcgataacgaatttctc
tatgatcgctcggggctgtcacgcgcacgcgcgcctcggcgaccacttggataa

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