Dinoroseobacter shibae: Dshi_3350
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Entry
Dshi_3350 CDS
T00612
Symbol
selD
Name
(GenBank) selenide, water dikinase
KO
K01008
selenide, water dikinase [EC:
2.7.9.3
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00450
Selenocompound metabolism
dsh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Dshi_3350 (selD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dsh03016
]
Dshi_3350 (selD)
Enzymes [BR:
dsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.9 Phosphotransferases with paired acceptors
2.7.9.3 selenide, water dikinase
Dshi_3350 (selD)
Transfer RNA biogenesis [BR:
dsh03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Dshi_3350 (selD)
Prokaryotic type
Dshi_3350 (selD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
AIRS
AIRS_C
Pyr_redox
AlaDh_PNT_C
Lycopene_cycl
Trp_halogenase
NAD_binding_8
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
ABV95083
RoseoBase:
Dshi_3350
UniProt:
A8LNI9
LinkDB
All DBs
Position
complement(3518104..3520233)
Genome browser
AA seq
709 aa
AA seq
DB search
MHTPYPLTQDVVLVGGGHTHALVLRKWAMSPLLGARLTLIDPNPTAPYSGMLPGHIAGHY
DRAALEIDLVRLARFAGARLVLGRAEGLDLAAREIHVSGRPPIRYHRASLDIGVTSRLPD
LPGFTDHALAAKPLGAFADRWEAFCTNPPPEPHVLILGGGVAGVELAMACAHRLGATAKV
TLIEASDTALAGMNAKTRDTLLGEMAAQGITLRLNARAAEIGADHVRLEGGEALRADITI
GATGARPQDWLAQTGLARVDGFVAVDDQLRSLSDDRIYAVGDCAHMGFAPRPKAGVYAVR
QAPILYHNLRADLTGRARKRYKPQSDYLKLVSTGRKAAVADKAGMRSSGALLWRLKDRID
RKFMAKFHDLPAMSAPDLPRLRAEGVQAALSGKPLCGGCGAKVGAGLLSDVLAGLPSPAR
DDVLSRPGDDAAILRHGAGQQVITTDHLRAFVEDPYLMTRIALQHALGDVWAMGADPQAV
LSQIILPKATPAVHAGMLAEITAAASEGARAVGAELVGGHTSIGAELSIGFTVTGLAPAR
AIGLDGARPGDRLVLTRPIGTGVLLAAEMQAAAPGQQVAALWELLAADQSKTARHLAAKA
HAMTDVTGFGLAGHLARLCAASGTGAEIRLDAIPIHAGAEALAAAGHRSSLYPANRALVP
DWPETTPRHELLFDPQTAGGLLAALPPGDPVPGTVEIGRVTADPGLRLV
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcacaccccctatcccttgacccaggacgtcgttctggtcggcggtggtcacacccat
gcgctggtcttgcggaaatgggcgatgagcccgctgctaggggcgcggctgaccctgatc
gacccgaatccgaccgcgccttattccgggatgttgccgggccatatcgccggacattat
gaccgcgccgcgctggagatcgacttggtccggctggcgcgctttgccggggcgcggctc
gtgttgggccgagcagaggggctggacctcgctgcccgggaaatccacgtgtcgggtcgc
ccgccgatccgctatcaccgggcgtcgctcgacatcggcgtgacctcccgcctgccggat
ctgcctggtttcacggatcatgctctggcggccaagccgctcggcgcattcgcggatcgc
tgggaagcgttctgcaccaacccgcccccggaaccccatgtgctgatcctgggcggcggc
gtcgccggggtcgaactggccatggcctgtgcgcatcggttgggcgctacggcgaaagtc
accctgatcgaggcgagcgatacggccctcgcgggcatgaacgccaagacccgcgatacc
cttctgggcgagatggccgcgcaaggcatcaccctgcgcctgaatgcccgtgccgccgag
atcggcgcggatcacgtgcggctggaggggggcgaggccctgcgcgccgacatcaccatc
ggagccaccggcgcgcgcccgcaagactggctggcgcagaccggcctcgcccgtgtcgat
gggttcgtcgccgtggatgaccagttgcgcagcctttccgatgatcggatctatgcggtg
ggcgattgcgctcatatgggctttgcgccccggcccaaagcgggcgtctatgccgtgcgc
caggcgccgatcctttatcataacctgcgcgcggacctgacgggacgtgcccgcaagcgc
tacaagccgcagtcggattacctcaagcttgtgtccacgggccgcaaggcggccgtggcc
gacaaggccgggatgcgcagctccggcgctctgttgtggcgcctgaaagaccgcatcgac
cgcaagttcatggcgaagttccacgacctgcccgcgatgtccgcgccggatctgccacgc
ctccgggccgaaggtgtccaagcggcgctatcgggcaaacccctttgcggcggctgcggg
gcaaaggtgggcgcggggttgctgagcgacgtattggcagggctcccttccccagcccgc
gacgacgtgctgtcccgccccggggacgatgcggcaatcctgcgccacggggcgggccag
caagtgatcactaccgatcacctgcgcgcctttgtcgaagacccgtacttgatgacccgc
atcgctttgcagcatgcgttgggtgatgtctgggccatgggtgctgatccgcaagccgtg
ttgtcccagatcatcctgcccaaggccaccccggccgtgcatgcgggcatgctggccgag
atcaccgccgccgccagcgaaggcgcgcgcgccgtaggggccgagcttgtgggcgggcat
accagtattggggcggagttgagcatcggctttaccgtgaccgggctcgcgcccgcccgc
gccatcggtctcgacggcgcgcgtcccggagatcgccttgtcctgacccgtcccattggc
accggcgtgcttctggcggcggaaatgcaggccgcggctcccgggcagcaggttgcggcc
ctgtgggaattgctggccgcggatcaatccaagaccgcgcgccaccttgctgccaaggcg
catgccatgacggacgtgaccgggttcgggttggcagggcatctcgcgcggctctgtgcg
gcctcgggcaccggggccgagattcgtctggacgcgatcccgatccatgccggggccgag
gcgttggcggcggccgggcatcgctcctctctctatccggccaatcgcgcgcttgtgccc
gactggccggagacgacgccccgccatgaattgctcttcgatccgcaaaccgctggcgga
ctgttggctgccctgccgccgggtgatccggtccccggcaccgtggagatcgggcgcgtt
accgccgatccaggcctgcgcctcgtctga
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