Dinoroseobacter shibae: Dshi_3416
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Entry
Dshi_3416 CDS
T00612
Symbol
hemD
Name
(GenBank) uroporphyrinogen-III synthase
KO
K01719
uroporphyrinogen-III synthase [EC:
4.2.1.75
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00860
Porphyrin metabolism
dsh01100
Metabolic pathways
dsh01110
Biosynthesis of secondary metabolites
dsh01120
Microbial metabolism in diverse environments
dsh01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
Dshi_3416 (hemD)
Enzymes [BR:
dsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
Dshi_3416 (hemD)
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GFIT
Motif
Pfam:
HEM4
Motif
Other DBs
NCBI-ProteinID:
ABV95149
RoseoBase:
Dshi_3416
UniProt:
A8LP84
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Position
3594171..3594887
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AA seq
238 aa
AA seq
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MVTQPPLPVLLTRPRAQSEQFAATLPPVLRPVISPLLHILHLDDLPPAPETATLIFTSGN
GVTAYATQHPGIGQSALCVGTKTTAIARDLGFDAISAEGDARAILDLAAAYPGPFVHVRG
KHTTGDIAGALRDLGKEVAEIIAYDQTPVELSETARAILEGPCAVPLFSPRTACLFTNAC
PTARTAQIIAMSPAVAEQLPEHAYSGISILEKPNAAAMRDALLAYAGGNHLEAGRTSG
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atggtcacacaaccgccgctgcctgttctgctcacgcgcccacgggcgcaatcggaacag
tttgctgcgacgttgccgcctgtcctgcggcctgtcatctccccgctgctgcacatcctt
catctcgacgatttgccgccagcccccgagacagcgacgctcatctttacctccggcaat
ggtgtcacggcctatgcgacgcaacacccgggcattgggcagtccgcgctctgcgtcggg
acaaagacgactgcgatcgcgcgcgatctggggttcgacgccatctcggcggagggggac
gcccgtgccattctggacctcgccgctgcataccccgggcccttcgtccatgttcgcggc
aagcatacgaccggcgatattgcgggcgcattgcgtgatctgggcaaggaggttgcagag
atcatcgcctatgatcagacgcccgttgagctgagcgaaacggcgcgcgcaatcctcgaa
ggaccctgcgccgtgccacttttctcgccccgaacggcctgcttgttcactaacgcctgc
ccgacggcccgcacagcgcagatcatcgcaatgagcccagcggttgcagaacaactcccc
gaacacgcctatagcgggataagtatcctcgaaaagcccaatgctgcggcaatgcgggac
gctcttttggcatatgcagggggcaatcatcttgaggcgggcaggacctctggctag
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