Dinoroseobacter shibae: Dshi_3561
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Entry
Dshi_3561 CDS
T00612
Symbol
nusA
Name
(GenBank) transcription elongation protein nusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dsh03021
]
Dshi_3561 (nusA)
03009 Ribosome biogenesis [BR:
dsh03009
]
Dshi_3561 (nusA)
Transcription machinery [BR:
dsh03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Dshi_3561 (nusA)
Ribosome biogenesis [BR:
dsh03009
]
Prokaryotic type
rRNA transcription factors
Dshi_3561 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_2
KH_1
KH_NusA_C
S1
Motif
Other DBs
NCBI-ProteinID:
ABV95294
RoseoBase:
Dshi_3561
UniProt:
A8LQ54
LinkDB
All DBs
Position
3746464..3748098
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AA seq
544 aa
AA seq
DB search
MAITSANQLELLQTAEAVAREKMIDPGLVIEAMEESLARAAKSRYGSEMDIRVSIDRKTG
VATFTRVRTVVEDEELENYQAELTVEQAKPYLDDPKVGDTIVDQVPPVEMGRIAAQSAKQ
VILQKVREAERDRQYEEFKDRAGTIINGVVKREEYGNVIVDIGRGEGVLRRNEKIGRESY
RPNDRIRCYIKDVRREVRGPQIFLSRTAPEFMAELFKMEVPEIYDGIIEIKAVARDPGSR
AKIAVISYDGSIDPVGACVGMRGSRVQAVVNELQGEKIDIIPWNEDQPTFLVNALQPAEV
SKVVLDEDAERIEVVVPDEQLSLAIGRRGQNVRLASQLTGLDIDIMTEAQESERRQAEFA
ERTNMFVEALDVDEVLAQLLVSEGFTNLEEVAYVEQEELLVIDGFDEDTAEELQTRAREF
LEEQAKKALERAREMGVEDSLVEFEGLTPQMLEALAADGVKTLEDFATCADWELAGGWTT
VDGERVKDEGVLEKFDVSLEEAQLLVMTARVQLGWVNPEDLEIEEDADPEAEGEAETEEG
APQV
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcacctctgccaaccagttggagctgttgcagaccgccgaggcggtggcgcgc
gagaagatgatcgacccgggcctcgtgatcgaggccatggaagagagcctcgcccgtgcc
gccaagtcgcgctacggctcggagatggacatccgtgtgtcgatcgaccgtaagaccggc
gtggcgaccttcacccgcgtgcgcaccgtggtcgaggacgaggagctggagaattaccag
gccgagctgaccgtggagcaggccaagccctatctcgacgatcccaaggtcggtgacacc
atcgtcgaccaggtgccgccggtggagatgggccggatcgccgcccagtcggccaaacag
gtgatcctgcagaaggtccgcgaggccgaacgcgaccgccagtacgaggaattcaaggac
cgcgcgggcacgatcatcaacggggtcgtcaagcgcgaggaatacggcaatgtcatcgtc
gacatcggccggggcgagggcgtgctgcgccgcaacgagaagatcgggcgcgagagctac
cggcccaatgaccgcatccgctgctacatcaaggatgtgcgccgcgaagtgcgcgggccg
cagatcttcctcagccgcaccgcgccggaattcatggccgagctgttcaagatggaagtg
ccggaaatctatgacggcatcatcgagatcaaggccgtggcccgggacccgggcagccgc
gcgaagatcgccgtgatctcctatgacgggtccatcgacccggtgggcgcctgcgtcggt
atgcgcggctcccgcgtgcaggcggtggtcaacgagcttcagggcgagaagatcgacatc
atcccgtggaacgaggaccagccgaccttcctggtgaacgcattgcagcccgccgaggtg
agcaaggtggtcctggacgaggatgcggaacggatcgaggtcgtggtcccggacgagcag
ctcagcctcgccatcgggcggcgcgggcagaacgtgcgtctggccagccagctgaccggg
ctggacatcgacatcatgaccgaggcgcaggaatcggagcgtcgtcaggccgagttcgcc
gagcgcaccaacatgttcgtcgaagcgctggacgtggacgaggtgctggcgcagctgctg
gtctccgaagggttcaccaacctcgaagaggtggcctatgtcgagcaggaagagctgctg
gtgatcgacgggttcgacgaggacaccgccgaggagctgcagacccgggcccgcgaattc
ctcgaagagcaggccaagaaggccctggagcgggcgcgcgagatgggcgtcgaggacagc
ctggttgaattcgagggcctgacgccccaaatgctggaagccctcgccgcagacggggtc
aagacgctcgaagacttcgcgacctgtgccgactgggagctggccggcggctggaccacg
gtcgatggcgagcgcgtgaaggacgaaggcgtgctggagaagttcgacgtgtccctcgaa
gaggcgcagcttctggtgatgacggcacgcgtgcagctcggctgggtcaacccggaggac
ctggagatcgaggaagacgccgatcccgaggccgaaggtgaagccgagaccgaagagggg
gcgccgcaggtctga
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