Dinoroseobacter shibae: Dshi_3724
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Entry
Dshi_3724 CDS
T00612
Name
(GenBank) extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh02010
ABC transporters
dsh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Dshi_3724
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Dshi_3724
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dsh02000
]
Dshi_3724
Transporters [BR:
dsh02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Dshi_3724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ABV95455
RoseoBase:
Dshi_3724
UniProt:
A8LT88
LinkDB
All DBs
Position
pDSHI01:131326..132480
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AA seq
384 aa
AA seq
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MQTAAVAALVAGSATAQDGPIRVGVVTPISGTYAGIGQQVSWGLDLAAEEINASGGIMGR
QIELIYEDSEANPAVAVQKAEKLMTAEDVDFLTGTVNSGATLAVGQVAERAGKLLATTVS
FSDAITGEKCSPNVFRVNARAGQQSAALAAWVESEKPGAKVFYLGPDYEMGRSTVAAFKS
NAEQVGAKSTGEVFAPLDSKDYSQYFGRIRAAQPEVLYTSVAGNDTVRLFTQMQDFGVRD
GLTILGASGTVTSQNIDAIGAAAEGFITGVGYSTLIDSPENKAFVEAFNARNGADPDLYG
ADSYGLLFAYKKAVEAAGGTGTDEVRAALEGLEWDTPQGVKTIRAGDHQAIQPMYAVQIK
DSAFTIANTIDGDAAIGPDTCERF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
ttgcagacagccgcagtcgcggcacttgtcgcggggtcggccacggcccaggacgggccg
atccgcgtcggcgtggtgacgccgatttcgggcacctatgccgggatcggccagcaggtc
agctgggggctcgacctcgcggcggaggagatcaacgcgtcgggtggcatcatgggccgc
cagattgagctgatctacgaggacagcgaggcgaacccggcggtcgccgtgcagaaagct
gaaaagctgatgaccgccgaggatgtcgatttcctgaccggcaccgtcaattccggtgcc
accctcgcggtcggccaggtggccgagcgggcgggcaagctgctggcaacgacggtctcc
ttctctgacgccatcaccggcgagaaatgttcgcccaacgtgttccgcgtgaacgcgcgg
gcaggccagcaatcggcggccctcgccgcctgggtcgaaagcgagaaaccgggtgccaag
gtgttctacctcggcccggactacgagatgggccgctcgaccgtcgccgcattcaaaagc
aacgcggaacaggtcggtgccaaatcgactggcgaagtttttgcgccactcgattccaag
gactacagccagtatttcggtcgaatccgtgccgcccagcctgaagtcctctatacttcg
gtcgcgggcaacgacaccgtgcgcctgttcacccagatgcaggatttcggtgtgcgtgac
gggctgaccatcctcggcgcgtccggcaccgtgaccagccagaacatcgacgccatcggc
gccgccgccgaagggttcatcaccggggtcggctattcgaccctgatcgacagcccggaa
aacaaggcgttcgtcgaggcattcaatgcccgcaacggggccgatccggacctttacggt
gccgacagctatggcctgctttttgcctacaagaaggcggtcgaagcggcgggcggcacc
ggcacggacgaggtgcgcgcagcactcgaagggcttgaatgggacacgccccagggcgtc
aagacgatccgcgcgggtgaccaccaggcgatccagccgatgtacgcggtgcagatcaag
gacagcgcgttcaccatcgccaataccatcgacggcgacgccgccatcggcccggacaca
tgtgaacgcttctag
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