KEGG   Dinoroseobacter shibae: Dshi_3979
Entry
Dshi_3979         CDS       T00612                                 
Symbol
virB4
Name
(GenBank) type IV secretion system protein VirB5
  KO
K03200  type IV secretion system protein VirB5
Organism
dsh  Dinoroseobacter shibae
Pathway
dsh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:dsh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Dshi_3979 (virB4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dsh02044]
    Dshi_3979 (virB4)
Secretion system [BR:dsh02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Dshi_3979 (virB4)
SSDB
Motif
Pfam: T4SS FliJ Mod_r T6PP_N PCRF pAdhesive_17 MCU Baculo_F Zw10_N DUF1421 PT26-6P_helical TorS_sensor_domain DASH_Dam1 TelK_muzzle DUF2232 COMPASS-Shg1 STX6_10_61_N Tweety
Other DBs
NCBI-ProteinID: ABV95707
RoseoBase: Dshi_3979
UniProt: A8LTZ9
LinkDB
Position
pDSHI03:38371..39180
AA seq 269 aa
MRDLLVRTALATTLGIGLHLGTLSAAVAQGVPVVDTQNIAQNIQQLRQMIEDEILQNEQL
TQLREQLATLTDQLAELQRTYEALTRLAELPEIIRTEMEDELNGLLDQEFGDILATIEAI
KTGDFSGLSGSGAGEIETQMDRVLADLGFDEDTLSEMATSGNPGANRVATQATTGALVSA
AAQNSYEDAGQSLERVDRLVGLIDDMEELKQSVDLNTRVTAELAIALVAMWQLEAIQTVG
DGTGGVIDAATIAEEQRFMDFTLPDLRAE
NT seq 810 nt   +upstreamnt  +downstreamnt
atgagagatttgctcgtgaggacggcattggccacgacgcttgggatcggtctgcatctc
ggcaccctgtccgctgccgtggcgcaaggtgtgccggtcgtcgacacccagaatatcgcg
caaaacatccagcagctccggcagatgatcgaagacgagattctgcaaaacgagcagctg
acgcagctccgtgaacagcttgccacactcacggatcaactcgcggagctgcaaagaact
tatgaagcactcacccgccttgccgagcttcccgagatcatccgcacggaaatggaagac
gagttgaacggcctgctcgaccaagagttcggggacatcctcgccactattgaggcgatc
aagactggggatttctcgggcctgtccggttctggcgcaggcgaaatcgaaacccagatg
gaccgggtgctggccgatctcggcttcgatgaagacaccctctcggaaatggccaccagc
ggcaatcccggggccaaccgcgtggcgacgcaggccacgaccggtgcgctcgtctcggcg
gcggcccagaacagctatgaggatgccggccaatcgctcgagcgggtagaccgccttgtc
gggctcatcgacgacatggaagagctcaagcaaagcgtcgatctcaacacgcgcgtgaca
gctgaattggccatcgccctcgtggcgatgtggcagctggaagcgattcaaaccgtgggc
gatggcacgggcggcgtgatcgatgccgccaccatcgccgaagagcagcgcttcatggat
ttcaccttgccggacctccgggccgagtga

DBGET integrated database retrieval system