Dinoroseobacter shibae: Dshi_4006
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Entry
Dshi_4006 CDS
T00612
Name
(GenBank) phage integrase
KO
K04763
integrase/recombinase XerD
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsh03036
]
Dshi_4006
Chromosome and associated proteins [BR:
dsh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
Dshi_4006
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Pertussis_S1
NatB_MDM20
Motif
Other DBs
NCBI-ProteinID:
ABV95733
RoseoBase:
Dshi_4006
UniProt:
A8LT62
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All DBs
Position
pDSHI03:70272..71276
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AA seq
334 aa
AA seq
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MTPLAPDLSAFLQTHLPHECGASRHTIAAYACAFTLLLRFVTGRVKRTPSELFIEDLDIQ
TIRAFLEHIEEGRANSVRSRNARLAAIKSFFRFVEHRQPACLEQAMMIRAMPTKRTDAKL
IDYLTKEEVRALLAAPNRHTPGGLRDRAMLHLTYAAGLRASELLAVRMDDFPDGSFSNVR
ILGKGRRERVLPLWKETQCAIRAWLAVRPGRVGPELFLNRDGRRMTRDGFAYRLRQHVAT
AERSTPSIAAKQVTPHVLRHSCAMHTLQATGDIRKVALWLGHASIQTTEMYLRADPTEKL
ALLEAHHAPLIQPGKFREPSDKLMQILAVAAQRA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaccccgctcgcccccgacctttcagccttcctgcaaacccatcttccccatgaatgc
ggcgcaagccgacataccatcgcagcctatgcctgtgcgttcaccctcttgctgcggttt
gtcacagggcgggtcaagcgaaccccatcggaacttttcattgaagacctggacattcag
acgatcagggcgttcctcgaacatatcgaagaaggacgcgccaattccgtccggtcccgc
aatgcgcgactggcggcgattaaatcgtttttccgtttcgtcgaacatcgccaaccggcc
tgccttgagcaggcgatgatgatccgggccatgccgaccaagcgaacagacgccaagctg
atcgattatcttacaaaggaagaagtccgcgccttgcttgccgcgccgaaccgccacacg
ccaggcggattgcgggaccgcgccatgctgcatctgacctatgccgcagggttgagagcg
tccgaacttctggctgtgcggatggacgattttcccgacgggtcgttttccaacgtacgg
atattgggcaaggggcgccgggagcgtgtgctgccgctctggaaggagactcaatgtgcc
attcgcgcgtggttggccgtcaggcccggtcgagtaggcccggaactgttcctgaaccgt
gatgggcgccgaatgacgcgggacggatttgcatatcggctaaggcaacatgtggcgaca
gccgagcgctcgacgccatcgattgccgcaaagcaggtcactccgcatgtgttgcggcac
agctgcgccatgcacacgcttcaggccaccggtgatatccgcaaggtcgcgctctggctt
ggccatgccagcatccagacgaccgagatgtatctgcgcgcggacccgaccgagaagcta
gcgcttctggaggcgcaccacgcacctctgatccaaccaggcaagttccgggagccgtcg
gacaagctgatgcagatcctagccgtcgccgcgcaacgtgcttga
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