Dinoroseobacter shibae: Dshi_4008
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Entry
Dshi_4008 CDS
T00612
Name
(GenBank) putative methylase/helicase
KO
K26273
protein strawberry notch
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dsh03036
]
Dshi_4008
Chromosome and associated proteins [BR:
dsh03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
Dshi_4008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
MTS
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABV95735
RoseoBase:
Dshi_4008
UniProt:
A8LU27
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Position
pDSHI03:complement(74000..76510)
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AA seq
836 aa
AA seq
DB search
MAKPKTANPTFSISDAALISALAQIGQEVDHQPLRSSALARIMRETFHGSDAGGVWEWRM
AYDLKQAAAIQVLLRGDGAACDIATAKLLASRLLTETRRSEQQIRLQQFSTPLPFAAMAV
RAAAIRKGETVLEPSAGTGALAAFAARAGATLLLNEIDPFRQSLLRAVFGGDVTGHDGEH
IDDLLQTPVLPDVVVMNPPFASSVDRSRDKHIAAKHLIAAAKRLAPGGRLVAIMPPGFTP
ERDTAHWSRACGLLTPRLALTMPGQVYRKLGTSVETQLMVFDKVQEDGEMIRASVRDLDE
ALPFVDAVAATRPEMRPVQRAVAIPHGRPTVPSSAPRKTAAAPVAASKPQANAVVQLSIK
SLEAPRDNTPVSDIYARYRPQRIEIADAQEHPTPLVESIAMASVAPPEPSGAAGSELRLP
ARLIKEGHLSEAQLETIIMANDAHGRNLPGRFTIDDDQTKLTRADDDPDARAYRLGYFLG
DGTGCGKGRECAGLILVNWLAGRRKAIWVSKSATLIEDAIRDWIDLGGSPADIQPLSKWK
PDQPIPMGDGILFVTYATLRSAGKCGTTRLSQILDWMGEDFDGVLAFDEAHAMQNAAGSE
QGRGVKPSQQGLAGLRLQLAAPRARVFYISATGATSVHNLAYAARLGLWGQGPEYPFPSR
ESFVSAMEAGGVAAMEVVARDLKTLGLYTARALSFDGVEYDVLEHALTPAQIEIYDAYAG
AFRTIHHNLEAALTATGVNDASGETNASAARASAKSRFESTKQRFFNHLLMGMKAPSIIR
AIEDDLATGHACVIQVVSTGESLLKRRLETMDAEDELVEGALTPRDYVLSKALDNT
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcccaagacggcgaacccgactttttcaatctccgacgctgctctcatctct
gccctcgcgcagatcggccaggaggtcgaccaccaacccctgcgcagttcagcgctcgcg
cgcatcatgcgcgagacgtttcatggcagcgatgctggcggcgtctgggagtggcgcatg
gcctacgacctgaagcaggccgccgccatccaggtgctgctgcgtggggacggcgcggca
tgtgacatcgccaccgcaaagctgcttgcctcgcggctgctgacggaaacgcgacggtca
gagcagcagatccggctgcagcagttttccacgccgttgcctttcgcggcaatggccgtg
cgggcggcagccattcgcaagggcgagaccgttctggagccctcggctggcaccggcgcc
ttggccgctttcgccgcccgggccggtgccacgcttttgctcaatgaaatcgaccccttt
cgccagagcctattgcgcgcggtctttggcggcgatgtgacgggccatgacggtgagcat
attgacgatctgctgcagacgccggttctgcccgacgtcgtggtgatgaatccgcccttc
gcttcctcggtcgatcgctcgcgagacaagcacatcgccgccaagcatctcattgcggca
gcgaagcgtctcgcgcccggtgggcggctggtggcgatcatgccgccaggattcacgccc
gaacgcgataccgcgcattggtcccgcgcctgcggtctcctgacgccgcgcttggcgctg
acgatgccgggacaggtctatcgcaaactcggcacctctgtggaaacccagctcatggtc
ttcgacaaggtgcaggaagacggcgagatgatccgcgccagtgttcgggacttggatgaa
gcccttccttttgtcgacgccgtggccgcaacccggcccgagatgcgccccgtacaaagg
gcagtggcgatccctcacgggcgaccgaccgttccatcctctgccccgcgtaagaccgcc
gctgcgcctgtcgccgcctccaaacctcaggcgaatgccgttgtccagctcagtatcaaa
agccttgaggctccgcgcgacaacacgcctgtctcggacatctatgcgcgttaccgccct
cagcgcatcgagatcgcggacgcgcaggaacatcccacgccgctcgtcgagagcatcgcc
atggcctctgtcgcgccacccgaaccttcgggtgccgccggttcggaattgcgtctgccc
gcacgattgatcaaggagggacatctctccgaggcacagctcgagaccatcatcatggcc
aatgatgcccatgggcgtaacctgccaggacggttcaccatcgatgacgatcagaccaag
ctgacgcgcgccgacgatgaccccgacgcacgggcctatcgcctcggctatttcctcggc
gacggcaccggctgcggcaagggccgcgaatgcgcggggctcatcctcgtgaactggctg
gccgggcgcagaaaggcgatctgggtctccaaatccgccacgctgatcgaggacgcgatc
cgcgactggatcgatcttggcggctcgcccgccgacatccagccgctctccaaatggaaa
cctgaccagcccatcccgatgggcgacggcatcctgttcgtgacctacgccacgctgcgc
tcggcgggcaaatgcggcaccacgcggctgagccagatccttgactggatgggcgaggat
ttcgacggtgtcctcgcttttgatgaggcccatgccatgcagaacgcggcggggtccgag
cagggcaggggcgtcaaaccctcccagcagggccttgcgggcctccggctgcaactggca
gcaccccgcgctcgcgtcttctacatctcggccacgggtgccacgagcgtgcacaaccta
gcctatgccgcgcggctggggctctgggggcagggccccgaataccccttcccaagccgc
gagagcttcgtttctgcgatggaagccggcggtgtcgctgccatggaggtggtcgcgcgc
gatctcaagacgctcgggctctacacggcccgcgccctcagcttcgacggcgtggagtat
gacgtgctcgaacacgcgctcaccccggcccagatcgagatctacgacgcctatgcgggt
gcgtttcgcaccatccaccacaatctcgaagccgcgctgacggcgaccggcgtcaacgac
gcctctggcgagaccaatgcctcggccgcacgcgcctcggccaagtcccgcttcgagagc
acgaaacagcgcttcttcaaccatctcctgatggggatgaaagccccaagcattatccgc
gccatcgaggacgacctggcaacgggccacgcgtgcgtcatccaggtggtctcgacaggc
gaaagcctgttgaagcggcggcttgagacgatggacgcagaagatgagctcgtcgagggg
gccttgacgccgcgcgactacgtcttatccaaagctttggataacacgtaa
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