Dinoroseobacter shibae: Dshi_4040
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Entry
Dshi_4040 CDS
T00612
Name
(GenBank) cyclic nucleotide-binding protein
KO
K21563
CRP/FNR family transcriptional regulator, dissimilatory nitrate respiration regulator
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsh03000
]
Dshi_4040
Transcription factors [BR:
dsh03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
Dshi_4040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
DUF5817_CT
AbiEi_4
TetR_C_31
Motif
Other DBs
NCBI-ProteinID:
ABV95767
RoseoBase:
Dshi_4040
UniProt:
A8LTC7
LinkDB
All DBs
Position
pDSHI03:102417..102983
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AA seq
188 aa
AA seq
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MLPNPYDHIPSSALRPISGAVGDTVFHQGDPTHGLYVVQTGRVHLERVGPDGERFIIHRA
QAGTSFAEASVFSEVYHCDAVIVEAGALIRIDKASVLAAFADPAFARAYGRQAAQQIQAQ
RQMLEIVGIRRAEDRVMAGLIAGLLEGSIVEFAARLQLSHEATYRALRKLVQDGRVMNPS
RGIYHLHP
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgttgccaaacccctatgatcatatcccgagctcagccctgcgcccaatctccggcgcg
gttggagataccgtatttcaccaaggcgaccccacccacggtctctatgtcgtgcaaacc
gggcgcgtgcatctcgagcgggtcggtccagatggcgagcggttcatcatccaccgtgcc
caagccggaacaagctttgccgaagcttcggtgttttcggaggtctatcattgcgacgca
gtcattgttgaggccggggcgctgatccggatcgacaaggcttccgtattggccgctttt
gccgacccggcatttgcccgcgcctatggccgtcaggcggctcaacagatacaggcgcag
cgacagatgctggagatcgtcggcattcggcgcgcagaggaccgggtgatggcagggttg
atcgcaggcttgctcgaaggctccatcgtcgaatttgccgctcggttacaattgagccat
gaggcgacctacagggcgctgcgaaagcttgtgcaagacggacgggtcatgaacccgtcc
cgcgggatctatcacctgcacccatga
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