Dinoroseobacter shibae: Dshi_4066
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Entry
Dshi_4066 CDS
T00612
Name
(GenBank) heavy metal-dependent transcription regulator
KO
K19591
MerR family transcriptional regulator, copper efflux regulator
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsh03000
]
Dshi_4066
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
dsh01504
]
Dshi_4066
Transcription factors [BR:
dsh03000
]
Prokaryotic type
Helix-turn-helix
MerR family
Dshi_4066
Antimicrobial resistance genes [BR:
dsh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexPQ-OpmE [MD:
M00769
]
Dshi_4066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MerR_1
MerR-DNA-bind
MerR
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
ABV95793
RoseoBase:
Dshi_4066
UniProt:
A8LTF3
LinkDB
All DBs
Position
pDSHI03:125896..126294
Genome browser
AA seq
132 aa
AA seq
DB search
MNIGDVARQSGVPPKTIRYYEDIGLIRPNRSENGYRAFTESHIHKLAFLGRARALGFTIE
DCRTLLSLYEDENRESMQVKAVAEDHLRQIEEKIAKLQSMRATLAELVEKCAGDHRPDCP
IIEDLSPERLAK
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcggagacgttgcccgacaatcgggtgtgcccccaaaaacaatccgctactac
gaggacatcgggctgatccgcccgaaccgtagcgagaacggctaccgcgcgttcaccgag
agccacattcacaagctggcgtttctgggtcgcgcacgggccttggggttcaccatcgaa
gattgcaggacgctcctgtcgctctacgaggatgaaaaccgcgaaagcatgcaagtgaag
gcggttgcggaagaccatctgcgccagatcgaggaaaagatcgcgaaactgcaatccatg
cgcgcgacgctcgccgaactggtggaaaaatgtgccggggatcaccggcccgactgcccc
atcatcgaggatctgtcgccggagcggttggccaagtga
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