Dinoroseobacter shibae: Dshi_4071
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Entry
Dshi_4071 CDS
T00612
Name
(GenBank) hypothetical protein
Organism
dsh
Dinoroseobacter shibae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
Beta_helix
PKD
PKD_4
Laminin_G_3
NosD
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
ABV95795
RoseoBase:
Dshi_4071
UniProt:
A8LU78
LinkDB
All DBs
Position
pDSHI04:3168..6497
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AA seq
1109 aa
AA seq
DB search
MSGSSYFKDYTAHQNATILVSSTEELNAAVAELAGTTGGTVLLSGEAGPYRLDARNLGDS
AESAVLITSQDSNNPAQLKQVYIDNSVYLSLTDVTIDSGDYGFERSGHLHDIYVKSGAHL
QFVDLTMTSTAEAPLGFDDDTVKAEDAVYLRNASDVLFADSTISNYYHGISLAGVRDTIV
TGNDISALQGDGIRGGGVNNVLVSDNHIHDFLGATNEYNHPDMIQFWTGFPEGMTNTDLT
ITGNLLNAGEGSAAQGILVQNEAFDDAGDPLEGVYGQNLTITDNVIHSGMSNGIGIIGYQ
GVEVANNSVLWNEGAVLSQTADAVPASNPPWILVRNSLEVETAGNVAHLVRIETEDQAET
NYFLDYDNPSAPNYAYAHVIGLAADGQTDVYDLQFRPDSPLNGVSGAEASTWTPSEAPVN
AVISQQPSLEDRAAVELSARYSTVDGQLVDPETAQVFWTLADGTVLEGLEVTVTFDTPGL
HEVTLDVLAPDGSSDSATRSVDIRGNGLFEADFARSETFGDGVEIVDPNGEAFSKKGVFT
LDGDSVFEVTRGNPEFETLHTLSMDVSFKPDAFEKNGWLVKWLKAVDLRVTDEKGLWLKI
ETDADVYEIRTEGNLLEKGEWADIAVDFDSHAGQMRLSLDGEELGRTDVEGTISGSQYDL
TLGEGRGRSAEGEIDYFSMTTPPAGSVLEIGDRFPEEPEEPEDETPPPVGVDDSFITDED
VKLSGDVLDNDINGQGAILTVSLLSDVSNGILLLNNDGTFDYTAAPDFNGSDSFTYTVSD
GSFTDTATVSITVNYVNDNPVLTADTVTTKEDISVNIDVVVNDTDVDGDTLSVSVVGAAS
NGTTSINLDGTVSYTPNLHFFGTDSFIYTAYDGHGGVRSSSVTVTVDAVNDAPVIEISNF
AVDEEQTTVGKIIASDVEDHDLDFAISGGADADLFDITEDGELSFLVAPDFEAPLDVGGT
SGDNIYEVEVSAFDTRGALSSALFNVAVKDVDEGVRPIEVLGTGDNDVLTGTVADERLIS
HGGRIDRMTGGGGADEFVFGPELDNNQRELDIIYDYDTDDTIILGSDDYRLISLGNSVLI
HHNDDGDLIYVLGTEAESLMIEIENSAVL
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttcctcctacttcaaggattacactgcccatcaaaacgccaccatccttgtt
tccagcacagaagaactcaatgccgctgtggcggagcttgctggcacgaccgggggtacg
gttctgctctcgggtgaggctggtccctaccgattggatgcgcgcaacctcggcgatagt
gccgagagcgcggttctgatcacctcccaagactcgaacaaccccgcgcaattaaagcag
gtctatatcgacaacagtgtctatctcagcctgaccgatgtgacgatcgatagcggggat
tacggattcgagcggtcaggccatctccatgacatctatgtaaagtccggagcgcatctg
caattcgtcgatctgaccatgaccagcactgccgaagcccccctcggcttcgatgacgac
accgtgaaggccgaggatgccgtctatctgcgcaatgcctcggacgttctattcgccgac
agcacgatctcgaattactaccacggtatcagtttggcaggggtacgcgatacgatcgta
accggcaacgacatctccgccttgcagggggacggtattcgcggcggcggcgtgaacaat
gttctggtctcggacaatcacatccatgatttcttgggtgcgaccaacgagtacaaccac
ccagacatgatccagttctggaccgggttcccagaggggatgaccaacaccgacctgacg
attaccggtaacctgctcaatgcgggcgaaggctccgctgctcagggcattctcgtacag
aacgaggccttcgatgacgcgggagaccctttggagggagtttatggtcaaaacctgacg
atcacggacaatgtcatccattcgggcatgtctaatggcatcgggatcatcggataccaa
ggggtcgaggttgccaacaattcggtgctttggaacgagggcgccgtgctgtcccagacg
gctgatgccgtaccggcctccaaccctccctggatcttggtacgcaacagcttggaagtc
gagaccgctggcaatgtcgctcacttggtccggatcgaaaccgaggaccaggccgagacc
aattactttctggactacgataatccgagtgcgccgaattatgcctatgcccatgtgatc
ggccttgccgccgatggccagacggacgtctacgacttgcaattccggcccgatagccca
ctcaacggggtctctggcgctgaggccagcacttggacgcccagcgaggccccggtgaac
gccgtgatctcccagcagcccagtctcgaggaccgcgcagcggtggagttgtcggcccgc
tattcgactgtggatggacaactggttgatcccgagactgcacaagtcttctggaccttg
gccgatggcaccgtcctggagggcctggaggtcacggtaactttcgacacgccggggctg
cacgaggtcacgctcgatgtccttgcgcctgatggcagttccgacagcgccacgagatcc
gtcgacatccgcggaaacggcctgttcgaggcggatttcgcccgttccgaaacctttggc
gacggtgtcgagattgtcgatcccaatggcgaagcgttctccaagaagggcgtgttcact
ctggatggcgacagtgttttcgaggtgacccgcggaaacccagagttcgagacgcttcat
accctgtccatggacgtctcattcaaaccggacgcgttcgaaaaaaacggctggctggtg
aaatggctcaaggcggtcgatctgcgggtgacagacgagaaggggctatggctcaaaatc
gagaccgatgccgacgtttacgagatccgcaccgagggtaaccttcttgagaagggcgaa
tgggctgacatcgcggtcgatttcgacagccatgcggggcagatgcgcttgtctctggac
ggcgaggaactcggccggaccgacgtcgaaggcaccatctcggggtcgcaatacgacctc
accttgggagagggccgggggcgcagcgccgaaggggagatcgattacttctcgatgacc
accccgcctgcaggatcggtgcttgagatcggagaccggtttccggaggaaccagaagag
cccgaagacgaaacacccccgccggtgggtgtggacgatagcttcatcacggacgaggat
gtaaaactctcgggcgatgtcttggataacgatatcaatggccaaggcgctatcctaacg
gtgagcctactcagcgatgtgtccaacggcatactactgctgaacaacgacggtaccttt
gattacaccgccgcaccggactttaacggctccgatagctttacctacacagtgtcggat
gggtcgttcactgatacggccacggtctcgatcacagtcaactatgtgaacgacaatcct
gtcctgaccgcagacacggtgacgacgaaggaggacatctcggttaatatcgacgtggtg
gtaaatgacacagatgtcgatggcgacacgttgagcgtgtcggtggtcggcgcggcttcg
aacggaactacatcaataaacctcgacggaacagtatcttatactcctaatctccatttc
ttcggcaccgacagctttatttacacagcctacgacggacatggcggcgtcaggtcgtca
tcggttaccgtcactgtcgatgcggttaacgacgcgccggtgatcgaaatctccaacttc
gcggtcgacgaagaacagacaactgtcggtaagataatcgcttctgacgtcgaagaccac
gatttagactttgccatctcgggcggcgcggatgccgacctcttcgacattacggaagac
ggcgaactcagcttcctcgttgctccggattttgaagcgccattagatgttggtggtacc
tctggcgacaatatctacgaagtcgaggtatcggcctttgacactaggggtgcgttgagc
agtgcactcttcaacgtcgcagtaaaggatgtagatgagggcgtcaggccgatcgaggtc
ctcgggacgggggacaacgacgtgctgaccggaaccgtggcagacgagcgcctcatctca
catggcggcagaatagaccggatgaccggcggtgggggtgcagatgaatttgtcttcggc
cctgaactcgacaacaaccaacgcgaactcgatattatctacgactacgacaccgatgat
acgatcatactgggctctgatgactatcgattaatttctctcggaaatagtgtattgatc
catcacaacgacgacggcgacttgatctatgtgctaggaacagaagcagagagtttaatg
atcgaaattgaaaactccgccgttctataa
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