Dinoroseobacter shibae: Dshi_4139
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Entry
Dshi_4139 CDS
T00612
Symbol
gmd
Name
(GenBank) GDP-mannose 4,6-dehydratase
KO
K01711
GDPmannose 4,6-dehydratase [EC:
4.2.1.47
]
Organism
dsh
Dinoroseobacter shibae
Pathway
dsh00051
Fructose and mannose metabolism
dsh00541
Biosynthesis of various nucleotide sugars
dsh01100
Metabolic pathways
dsh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
Dshi_4139 (gmd)
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Dshi_4139 (gmd)
Enzymes [BR:
dsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.47 GDP-mannose 4,6-dehydratase
Dshi_4139 (gmd)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
ABV95850
RoseoBase:
Dshi_4139
UniProt:
A8LUD3
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Position
pDSHI04:complement(71700..72764)
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AA seq
354 aa
AA seq
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MKRALITGVTGQDGAYLSELLLAKGYDVHGIKRRSSSFNSARIDHLYQDPHEADRRFTMH
YGDMTDSTNLIRVVQEVQPDEIYNLAAQSHVQVSFDTPEYTANADAVGTLRLLEALRILG
MEKTTRFYQASTSELYGLVQEVPQSETTPFYPRSPYAAAKLYAYWITVNYREAYGIHASN
GILFNHESPLRGETFVTRKITRAVAAIHLGRQDRFYLGNLDAKRDWGHARDYVEGMWRIV
QQDKAEDYVLATGETHTVRSFVDAAFAEIGVTLEWRGAGVDEKGYDTADGTLRVEVDPRY
FRPTEVDLLIGDPSKAHRELGWRHTTTLAEMVSEMVASDIKVIAEEGERRERHD
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgggcattgatcacaggcgtgaccgggcaggacggggcctatctgtcagaactt
cttctggccaagggctatgacgtgcacgggatcaagcgacgctcgtcgtcgttcaattcc
gcgcggatcgaccatctttatcaggatccccacgaggcggaccgccgcttcaccatgcat
tacggcgacatgactgacagcacgaacctgatcagggtcgtgcaggaggtgcaaccggac
gagatctacaacctcgcggcccagtcccatgtgcaggtcagcttcgacacccccgaatac
accgccaacgcggacgcggtgggcactctgcgcctgctggaagccctccgcatcctgggg
atggagaagaccacccggttctaccaagcctccacctcggaattgtacggcctggtccag
gaagtcccccagagcgaaaccacccccttctatccgcgatctccctatgcggcggccaag
ctctatgcctactggatcacggtgaactaccgcgaagcctacggcatccacgcctccaac
gggatcctgttcaaccatgaaagccccctgcgcggggagaccttcgtgacccgcaagatc
acccgggcggtggcggcgatccacctgggtcggcaggatcggttctatctgggcaatctc
gacgccaagcgcgactggggccatgcccgtgactacgtggaaggaatgtggcgcatcgtg
cagcaggacaaggcggaggattacgtgctggccacgggcgagacccatacggtgcgctcc
ttcgtggacgccgctttcgcagagatcggcgtgaccctggagtggcgcggcgcgggcgtg
gacgagaaaggctacgacaccgccgacggcaccctgcgggtcgaggtcgatccgcgctat
ttccgccccacagaggtggatctgctgatcggggatccctccaaggcccatcgggaactg
ggctggcggcatacgaccaccctggcggagatggtctcggaaatggtggccagcgacatc
aaggtgatcgccgaggaaggtgagcgccgtgagcgccatgactaa
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