Dinoroseobacter shibae: Dshi_4163
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Entry
Dshi_4163 CDS
T00612
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
Organism
dsh
Dinoroseobacter shibae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ABV95873
RoseoBase:
Dshi_4163
UniProt:
A8LUF6
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Position
pDSHI05:complement(10765..12342)
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AA seq
525 aa
AA seq
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MSAVATAPRARAGRGQNRGTWIGLILILALWELSGRLLVDSFVLASPSETLRYLVEDWRL
MSRALGVTLSNAAAGFVIGNLAAVLLAGIAILWPRSERVVTGLALLVFCLPLVATGPILR
VFFGPGSGPQIVLAALAVYYTTLIPLLVGLRAAPDSWFDLVRSYGRGRMAALVHVRLMAA
LPYLFAGLQIAAPAAFLGAMVGEFTGAERGMGVLTVRAIRALDVEMTWGLATVATAVAIL
AYLAIGAVARRVLLEAPPVILAAPAASGRSRPALDAGLVVALALAGWAGAIWLFGLNPFF
AKGPLDVAEALIWAADAPQTRATIGAALAETAVFLLPGYLAGLAAGAGLAILLVLVPAIA
GTAMPLAIALRSVPIVTTAPLIVLLLGRGAVGTITLVAVMVFFPSFVACLHGLRQAPGQV
MDVFDSYAAGPVARLMRVRIPAMLPAFFAAARMAVPASVLAVTVVEWLATGAGIGSLMAL
SASLSDYDMLWSSVVLVSALSALGYAAVGVVERRVLATYAPEQLA
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcggtggcaacggccccccgggcgcgggccgggcgggggcaaaaccgggggacg
tggatcgggctgatcctcatcctcgcgctctgggagctgtccgggcggcttctggtcgat
tccttcgtgctcgccagcccgagcgagaccctgcgctacctggtcgaggactggcggctg
atgtcccgcgcgctcggtgtgaccctgtcgaacgcggcggcgggcttcgtgatcggcaac
ctggcggcggtgctgctggccggtatcgcgatcctctggccgcgcagcgaacgggtggtg
acgggtctggccctgctggtcttctgcctgccgctggtggcgacggggccgatcctgcgg
gtgttcttcggccccggctccggtccgcagatcgttctggcggctcttgcggtctattac
accacgctgatccccctgctggtggggctgcgcgccgcacccgacagctggttcgacctg
gtgcgcagttacgggcgcgggcggatggccgccctggtgcatgtgcggctgatggcggcc
ctgccctacctttttgccgggttgcagatcgccgcccccgccgcgttcctcggcgccatg
gtcggcgagttcaccggagccgagcgcggcatgggcgtgctgaccgtgcgcgcgatccgg
gcgctggatgtggagatgacctgggggctggccacggtggccacggcggtggcgatcctc
gcctatctcgcgatcggggccgtggcacgccgggtgttgctggaggcgccgccggtgatc
ctcgccgcccccgccgcaagcgggcgcagccgcccggcgctggatgccgggctggtcgtc
gcgctcgccctggcgggctgggccggggcgatctggctcttcgggctgaacccgtttttc
gccaaggggccgctggacgtggccgaggccctgatatgggccgccgacgcgccgcagacg
cgcgccaccatcggcgccgccctggccgagacggcggtcttcctgctgcccggctacctc
gccgggctggccgcgggggcggggcttgccatcctgctggtgctggtccccgcgatcgcg
gggaccgcgatgcccctggccattgccctgcgctcggtcccgatcgtgaccaccgcgccg
ctcatcgtgctgctcctggggcgcggggcagtggggaccatcacgctggtggcggtcatg
gtattctttcccagcttcgtcgcctgcctgcacgggttgcggcaagccccgggccaggtg
atggacgtgttcgacagctatgccgccgggccggtcgcgcggctgatgcgggtgcgcatc
ccggcgatgctgccagcgttcttcgccgcggcgcgcatggcggtgccggcctcggtcctc
gccgtgacggtggtggaatggctggccaccggcgcgggcatcggcagcctcatggcgctg
tcggcctccctgtcggattacgacatgctgtggtcctcggtcgtgctggtctcggccctc
tcggcgctcggctacgccgccgtgggcgtggtggagcggcgcgtcctcgccacctacgcg
ccggagcagctggcatga
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