Dinoroseobacter shibae: Dshi_4172
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Entry
Dshi_4172 CDS
T00612
Name
(GenBank) transcriptional regulator, AraC family
KO
K07506
AraC family transcriptional regulator
Organism
dsh
Dinoroseobacter shibae
Brite
KEGG Orthology (KO) [BR:
dsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dsh03000
]
Dshi_4172
Transcription factors [BR:
dsh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
Dshi_4172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_35
Motif
Other DBs
NCBI-ProteinID:
ABV95882
RoseoBase:
Dshi_4172
UniProt:
A8LUG5
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All DBs
Position
pDSHI05:21403..22290
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AA seq
295 aa
AA seq
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MPRRYQDIYPSLPLLNSEAQTHISAAALMSVRYFQAAPDEMPEDVFAEHHVLLNLQDAPH
RVQNRRDGVLHDFTFHKHEIVVTPAGMRSGWRWFATSDVIVVTLDPEMVGRFAQSELGLL
LDPQQFRDLPLFSDPDLCAAGVMLRDALEDDSLTSGVMFEALSRVLLVKLLQRYGQRRVE
DADLSARFTAQHYNRVLTHIRAHLDRTITVEHLSREAGMSPSHFSRVFKETLGTTPMQYV
MAYRIEQAMKMMADPLRPLGDIALACGFADQAHFSRSFKQVTGRTPRAHRAALSA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccgataccaggacatctatccgtccctgcccttgctcaacagcgaggcgcag
acccatatctccgccgcggcgctgatgtccgtgcgctatttccaggccgccccggacgag
atgcccgaagatgtcttcgccgagcaccacgtgcttctgaacctgcaggatgcaccgcac
cgggtgcagaaccggcgcgacggggtgctgcatgatttcaccttccacaagcacgagatc
gtggtcaccccggcggggatgcggtcgggctggcgctggttcgcgacgtcggacgtgatc
gtggtgacgctcgaccccgagatggtcggccgcttcgcccagtccgagctcggcctgctg
ctcgacccgcagcaattccgcgacctgccgctcttctccgaccccgatctctgcgccgcc
ggggtcatgctgcgcgacgcgctggaggatgacagcctgacctccggcgtgatgttcgag
gcactctcccgggtgctgctggtcaagctgctgcaacgctacgggcagcgccgggtcgag
gatgcggacctctcggcgcgcttcacggcgcagcattacaaccgggtgctcacccatatc
cgcgcccatctcgaccgcacgatcacggtcgagcatctgtcgcgggaggcgggcatgtcg
ccctcccatttcagccgggtcttcaaggaaacactgggcaccacgcccatgcagtatgtc
atggcctaccggatcgagcaggcgatgaagatgatggccgatcccctgcgccccctgggc
gatatcgcgctggcctgcggctttgccgaccaggcgcatttctcgcgcagcttcaagcag
gtcacgggccgaaccccccgcgcgcaccgcgccgccctgtcggcctga
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