Drosophila simulans: Dsimw501_GD25005
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Entry
Dsimw501_GD25005 CDS
T01065
Symbol
Dsim_GD25005
Name
(GenBank) uncharacterized protein, isoform A
KO
K23600
TAR DNA-binding protein 43
Organism
dsi
Drosophila simulans
Pathway
dsi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dsi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Dsimw501_GD25005 (Dsim_GD25005)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dsi03019
]
Dsimw501_GD25005 (Dsim_GD25005)
Messenger RNA biogenesis [BR:
dsi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
Dsimw501_GD25005 (Dsim_GD25005)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TDP-43_N
RRM_1
RRM_PARP14_3
RRM_7
RBD_AKAP-17A
Motif
Other DBs
NCBI-ProteinID:
KMY96135
UniProt:
B4QB08
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Position
2R
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AA seq
531 aa
AA seq
DB search
MDFVQVSEEEGDEPIELPAEEDGTLLLSTLQAQFPGSCGLKYRNLDTKAVRGVRSNEGRL
FPPSVESGWGEYAYFCVFPKENKRKSDDNLENSTAKTKRIETRLRCTDLIVLGLPWKTTE
ESLREYFETYGEVLMAQIKKDTKSGQSKGFGFVRFGSYDAQMRVLTNRHLIDGRWCEVKV
PNSKGMGHQVPCKVFVGRCTEDINSDDLREYFSKFGEVTDVFIPRPFRAFSFVTFLDPDV
AQSLCGEDHIIKGVSVHVSNAAPKAEQNRNQQVQSYNYNSANSFGMHSYHPQGNHMNPGR
NGHHRGNNQHNAHGGENAIVPNNHNIGTAGYGMGGNNYGGNSGGGYHNNGGNHSSGGNAN
RQDGGSQYNSRQSNFHGMNQPHNGNVGGSNGWMNRGHLDMPNLQALGINSQGSSSSNQGQ
NMSNQSMLNLNSLPINPALVAAALNQWSLVGNQLQNQNQDQQGGNFLSWMAQNGGHNNAN
NFGGRKGPNNPNNNPVANGIKTDNSESQNGNTGWSNQSSGSQNTAEKSNFL
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgtccaagtgtcggaggaggagggcgacgagcccatcgagctgccggctgag
gaggatggcactctgctgctgtccacactgcaggcgcagttccctggatcctgcggccta
aagtaccgcaacctggacacgaaggctgtgcgcggagttcgctccaacgagggcagactg
tttccgcccagcgtggagtccggctggggcgagtacgcctacttttgcgtcttccccaag
gagaacaagcgcaagagcgacgataacttggagaactcaactgccaagaccaagcgcatc
gagacccgtctgcgctgcactgatctcatcgtgctcggcttgccgtggaagaccaccgag
gagagcttgcgtgagtacttcgagacctacggcgaggtgctgatggcccagatcaagaag
gacaccaagtcgggccagtccaagggcttcgggttcgtgcgcttcggctcttacgatgcc
cagatgcgcgtgctcaccaatcgccatctgatcgacggtcgctggtgcgaggttaaggtg
cccaactcgaagggcatgggccaccaggtgccttgcaaggtgttcgtgggccgctgcacc
gaggacataaactcggacgacttgcgcgagtatttctccaagtttggcgaggtcactgat
gtgttcattccccggcccttcagggcctttagctttgtaaccttcctcgaccccgacgtg
gcacagtccctgtgcggagaggatcacattatcaagggcgtttcggtccatgtgtcgaat
gctgccccaaaggccgagcagaacagaaaccagcaggtccagagctacaactacaactct
gccaacagctttggcatgcactcataccacccacagggtaaccacatgaatccgggccgc
aacggacaccaccgaggtaataaccaacacaatgctcacggcggtgagaacgcaattgtg
cccaataatcacaacattggcaccgccggctacggcatgggtggcaacaattacggcggg
aactcgggcgggggctaccacaacaatggcggcaatcactccagtggcgggaacgcgaac
cgccaggacggcggcagccagtacaacagtcgccagtcgaattttcacgggatgaaccag
ccgcataacggcaacgtgggcggcagcaacggctggatgaaccgtggccacctggacatg
cccaacctgcaggcgctgggcatcaactcgcagggctcgagctcctccaaccagggccag
aacatgagcaaccagtcaatgctcaatctgaactcattgcccataaatcccgcactggtc
gctgccgccttgaaccagtggagtctggtcggcaaccagctgcagaaccaaaaccaggac
cagcagggcggcaattttctatcctggatggctcagaacgggggccacaacaacgcgaac
aactttggtggacggaaggggccgaataacccgaacaacaatccggtcgccaacggaata
aagaccgacaactcggagtcacagaatgggaacaccggttggtcgaaccagagcagcgga
tctcaaaacaccgcggagaagtcaaactttctttaa
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